JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:52 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1v0wa1.name2015-04-17 16:51 0 Job name flag file
[ ]jp_RB1thJo.align2015-04-17 17:50 247KPSIBLAST alignment in FASTA format
[TXT]jp_RB1thJo.als2015-04-17 17:50 3.3KAlscript command file for PS/PDF output
[ ]jp_RB1thJo.blast.gz2015-04-17 17:48 11MCompressed PSIBLAST output file
[TXT]jp_RB1thJo.coils.csv2015-04-17 17:50 1.5KCOILS output in CSV format
[ ]jp_RB1thJo.coilseq.lupas_142015-04-17 17:50 11KCOILS output, window length 14
[ ]jp_RB1thJo.coilseq.lupas_212015-04-17 17:50 11KCOILS output, window length 21
[ ]jp_RB1thJo.coilseq.lupas_282015-04-17 17:50 11KCOILS output, window length 28
[ ]jp_RB1thJo.concise2015-04-17 17:50 489KPrediction: coiled-coil, solvent, alignment
[ ]jp_RB1thJo.concise.blc2015-04-17 17:50 247KBLC format prediction and alignment data
[ ]jp_RB1thJo.concise.fasta2015-04-17 17:50 250KPrediction: coiled-coil, solvent, alignment
[ ]jp_RB1thJo.concise.pdf2015-04-17 17:51 1.6MPDF prediction and alignment data
[ ]jp_RB1thJo.concise.ps2015-04-17 17:50 29MPrediction: coiled-coil, solvent, alignment
[ ]jp_RB1thJo.fasta2015-04-17 17:44 272 Input query sequence in FASTA format
[ ]jp_RB1thJo.full_MSA.fasta2015-04-17 17:49 43MFull MSA before JPred filters in FASTA
[TXT]jp_RB1thJo.full_MSA.fasta.noGaps.html2015-04-17 17:52 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_RB1thJo.full_MSA.fasta.withGaps.html2015-04-17 17:52 102MFull MSA before JPred filters in FASTA
[ ]jp_RB1thJo.hmm2015-04-17 17:50 48KHHMer2 profile of the alignment
[TXT]jp_RB1thJo.html2015-04-17 17:50 443KHTML prediction and alignment data
[ ]jp_RB1thJo.input2015-04-17 16:51 263 Raw input data for analysis
[ ]jp_RB1thJo.jalview2015-04-17 17:50 5.9KJalview annotation file for alignment
[ ]jp_RB1thJo.jnet2015-04-17 17:50 9.4KJnet secondary structure output
[TXT]jp_RB1thJo.profile2015-04-17 17:46 41KPSIBLAST profile from alignment
[ ]jp_RB1thJo.pssm2015-04-17 17:50 55KPSIBLAST PSSM for Jnet
[TXT]jp_RB1thJo.results.html2016-02-15 12:18 109KJPred results page
[TXT]jp_RB1thJo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_RB1thJo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_RB1thJo.seq2015-04-17 16:51 272 Sequence data file
[TXT]jp_RB1thJo.simple.html2015-04-17 17:50 1.7KBrief HTML: sequence and prediction only
[TXT]jp_RB1thJo.svg.html2015-04-17 17:52 101KJalview SVG summary of results
[ ]jp_RB1thJo.tar.gz2015-04-17 17:52 22MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.