JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:21 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1v6pa_.name2015-04-17 16:08 0 Job name flag file
[ ]jp_yHJYS_h.align2015-04-17 17:21 13KPSIBLAST alignment in FASTA format
[TXT]jp_yHJYS_h.als2015-04-17 17:21 1.7KAlscript command file for PS/PDF output
[ ]jp_yHJYS_h.blast.gz2015-04-17 17:21 34KCompressed PSIBLAST output file
[TXT]jp_yHJYS_h.coils.csv2015-04-17 17:21 402 COILS output in CSV format
[ ]jp_yHJYS_h.coilseq.lupas_142015-04-17 17:21 2.6KCOILS output, window length 14
[ ]jp_yHJYS_h.coilseq.lupas_212015-04-17 17:21 2.6KCOILS output, window length 21
[ ]jp_yHJYS_h.coilseq.lupas_282015-04-17 17:21 2.6KCOILS output, window length 28
[ ]jp_yHJYS_h.concise2015-04-17 17:21 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_yHJYS_h.concise.blc2015-04-17 17:21 14KBLC format prediction and alignment data
[ ]jp_yHJYS_h.concise.fasta2015-04-17 17:21 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_yHJYS_h.concise.pdf2015-04-17 17:21 71KPDF prediction and alignment data
[ ]jp_yHJYS_h.concise.ps2015-04-17 17:21 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_yHJYS_h.fasta2015-04-17 16:34 75 Input query sequence in FASTA format
[ ]jp_yHJYS_h.full_MSA.fasta2015-04-17 17:21 35KFull MSA before JPred filters in FASTA
[TXT]jp_yHJYS_h.full_MSA.fasta.noGaps.html2015-04-17 17:21 48KFull MSA before JPred filters in FASTA
[TXT]jp_yHJYS_h.full_MSA.fasta.withGaps.html2015-04-17 17:21 204KFull MSA before JPred filters in FASTA
[ ]jp_yHJYS_h.hmm2015-04-17 17:21 12KHHMer2 profile of the alignment
[TXT]jp_yHJYS_h.html2015-04-17 17:21 50KHTML prediction and alignment data
[ ]jp_yHJYS_h.input2015-04-17 16:08 69 Raw input data for analysis
[ ]jp_yHJYS_h.jalview2015-04-17 17:21 2.0KJalview annotation file for alignment
[ ]jp_yHJYS_h.jnet2015-04-17 17:21 2.4KJnet secondary structure output
[TXT]jp_yHJYS_h.profile2015-04-17 17:20 10KPSIBLAST profile from alignment
[ ]jp_yHJYS_h.pssm2015-04-17 17:21 13KPSIBLAST PSSM for Jnet
[TXT]jp_yHJYS_h.results.html2016-02-15 12:18 34KJPred results page
[TXT]jp_yHJYS_h.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_yHJYS_h.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_yHJYS_h.seq2015-04-17 16:08 75 Sequence data file
[TXT]jp_yHJYS_h.simple.html2015-04-17 17:21 1.0KBrief HTML: sequence and prediction only
[TXT]jp_yHJYS_h.svg.html2015-04-17 17:21 26KJalview SVG summary of results
[ ]jp_yHJYS_h.tar.gz2015-04-17 17:21 166KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.