JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:21 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1v7za_.name2015-04-17 16:09 0 Job name flag file
[ ]jp_WxEFzZC.align2015-04-17 17:20 229KPSIBLAST alignment in FASTA format
[TXT]jp_WxEFzZC.als2015-04-17 17:20 3.2KAlscript command file for PS/PDF output
[ ]jp_WxEFzZC.blast.gz2015-04-17 17:19 2.7MCompressed PSIBLAST output file
[TXT]jp_WxEFzZC.coils.csv2015-04-17 17:20 1.5KCOILS output in CSV format
[ ]jp_WxEFzZC.coilseq.lupas_142015-04-17 17:20 11KCOILS output, window length 14
[ ]jp_WxEFzZC.coilseq.lupas_212015-04-17 17:20 11KCOILS output, window length 21
[ ]jp_WxEFzZC.coilseq.lupas_282015-04-17 17:20 11KCOILS output, window length 28
[ ]jp_WxEFzZC.concise2015-04-17 17:20 454KPrediction: coiled-coil, solvent, alignment
[ ]jp_WxEFzZC.concise.blc2015-04-17 17:20 230KBLC format prediction and alignment data
[ ]jp_WxEFzZC.concise.fasta2015-04-17 17:20 232KPrediction: coiled-coil, solvent, alignment
[ ]jp_WxEFzZC.concise.pdf2015-04-17 17:20 1.6MPDF prediction and alignment data
[ ]jp_WxEFzZC.concise.ps2015-04-17 17:20 28MPrediction: coiled-coil, solvent, alignment
[ ]jp_WxEFzZC.fasta2015-04-17 16:34 273 Input query sequence in FASTA format
[ ]jp_WxEFzZC.full_MSA.fasta2015-04-17 17:19 4.0MFull MSA before JPred filters in FASTA
[TXT]jp_WxEFzZC.full_MSA.fasta.noGaps.html2015-04-17 17:20 815KFull MSA before JPred filters in FASTA
[TXT]jp_WxEFzZC.full_MSA.fasta.withGaps.html2015-04-17 17:20 14MFull MSA before JPred filters in FASTA
[ ]jp_WxEFzZC.hmm2015-04-17 17:20 48KHHMer2 profile of the alignment
[TXT]jp_WxEFzZC.html2015-04-17 17:20 414KHTML prediction and alignment data
[ ]jp_WxEFzZC.input2015-04-17 16:09 264 Raw input data for analysis
[ ]jp_WxEFzZC.jalview2015-04-17 17:20 5.9KJalview annotation file for alignment
[ ]jp_WxEFzZC.jnet2015-04-17 17:20 9.4KJnet secondary structure output
[TXT]jp_WxEFzZC.profile2015-04-17 17:09 41KPSIBLAST profile from alignment
[ ]jp_WxEFzZC.pssm2015-04-17 17:20 55KPSIBLAST PSSM for Jnet
[TXT]jp_WxEFzZC.results.html2016-02-15 12:18 109KJPred results page
[TXT]jp_WxEFzZC.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_WxEFzZC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_WxEFzZC.seq2015-04-17 16:09 273 Sequence data file
[TXT]jp_WxEFzZC.simple.html2015-04-17 17:20 1.7KBrief HTML: sequence and prediction only
[TXT]jp_WxEFzZC.svg.html2015-04-17 17:21 101KJalview SVG summary of results
[ ]jp_WxEFzZC.tar.gz2015-04-17 17:21 6.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.