JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:47 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vd6a_.name2015-04-17 15:31 0 Job name flag file
[ ]jp_GkE6ZJv.align2015-04-17 15:46 162KPSIBLAST alignment in FASTA format
[TXT]jp_GkE6ZJv.als2015-04-17 15:46 3.7KAlscript command file for PS/PDF output
[ ]jp_GkE6ZJv.blast.gz2015-04-17 15:44 20MCompressed PSIBLAST output file
[TXT]jp_GkE6ZJv.coils.csv2015-04-17 15:46 1.3KCOILS output in CSV format
[ ]jp_GkE6ZJv.coilseq.lupas_142015-04-17 15:46 9.2KCOILS output, window length 14
[ ]jp_GkE6ZJv.coilseq.lupas_212015-04-17 15:46 9.2KCOILS output, window length 21
[ ]jp_GkE6ZJv.coilseq.lupas_282015-04-17 15:46 9.2KCOILS output, window length 28
[ ]jp_GkE6ZJv.concise2015-04-17 15:46 322KPrediction: coiled-coil, solvent, alignment
[ ]jp_GkE6ZJv.concise.blc2015-04-17 15:46 163KBLC format prediction and alignment data
[ ]jp_GkE6ZJv.concise.fasta2015-04-17 15:46 165KPrediction: coiled-coil, solvent, alignment
[ ]jp_GkE6ZJv.concise.pdf2015-04-17 15:47 1.2MPDF prediction and alignment data
[ ]jp_GkE6ZJv.concise.ps2015-04-17 15:46 21MPrediction: coiled-coil, solvent, alignment
[ ]jp_GkE6ZJv.fasta2015-04-17 15:36 234 Input query sequence in FASTA format
[ ]jp_GkE6ZJv.full_MSA.fasta2015-04-17 15:46 32MFull MSA before JPred filters in FASTA
[TXT]jp_GkE6ZJv.full_MSA.fasta.noGaps.html2015-04-17 15:47 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_GkE6ZJv.full_MSA.fasta.withGaps.html2015-04-17 15:47 65MFull MSA before JPred filters in FASTA
[ ]jp_GkE6ZJv.hmm2015-04-17 15:46 41KHHMer2 profile of the alignment
[TXT]jp_GkE6ZJv.html2015-04-17 15:46 313KHTML prediction and alignment data
[ ]jp_GkE6ZJv.input2015-04-17 15:31 225 Raw input data for analysis
[ ]jp_GkE6ZJv.jalview2015-04-17 15:46 5.2KJalview annotation file for alignment
[ ]jp_GkE6ZJv.jnet2015-04-17 15:46 8.0KJnet secondary structure output
[TXT]jp_GkE6ZJv.profile2015-04-17 15:43 35KPSIBLAST profile from alignment
[ ]jp_GkE6ZJv.pssm2015-04-17 15:46 47KPSIBLAST PSSM for Jnet
[TXT]jp_GkE6ZJv.results.html2016-02-15 12:18 98KJPred results page
[TXT]jp_GkE6ZJv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GkE6ZJv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GkE6ZJv.seq2015-04-17 15:31 234 Sequence data file
[TXT]jp_GkE6ZJv.simple.html2015-04-17 15:46 1.7KBrief HTML: sequence and prediction only
[TXT]jp_GkE6ZJv.svg.html2015-04-17 15:47 90KJalview SVG summary of results
[ ]jp_GkE6ZJv.tar.gz2015-04-17 15:48 27MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.