JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:59 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vf7a_.name2015-04-17 15:31 0 Job name flag file
[ ]jp_FCfDtO9.align2015-04-17 15:57 238KPSIBLAST alignment in FASTA format
[TXT]jp_FCfDtO9.als2015-04-17 15:57 3.7KAlscript command file for PS/PDF output
[ ]jp_FCfDtO9.blast.gz2015-04-17 15:52 19MCompressed PSIBLAST output file
[TXT]jp_FCfDtO9.coils.csv2015-04-17 15:57 1.4KCOILS output in CSV format
[ ]jp_FCfDtO9.coilseq.lupas_142015-04-17 15:57 10KCOILS output, window length 14
[ ]jp_FCfDtO9.coilseq.lupas_212015-04-17 15:57 10KCOILS output, window length 21
[ ]jp_FCfDtO9.coilseq.lupas_282015-04-17 15:57 10KCOILS output, window length 28
[ ]jp_FCfDtO9.concise2015-04-17 15:57 469KPrediction: coiled-coil, solvent, alignment
[ ]jp_FCfDtO9.concise.blc2015-04-17 15:57 237KBLC format prediction and alignment data
[ ]jp_FCfDtO9.concise.fasta2015-04-17 15:57 240KPrediction: coiled-coil, solvent, alignment
[ ]jp_FCfDtO9.concise.pdf2015-04-17 15:58 1.7MPDF prediction and alignment data
[ ]jp_FCfDtO9.concise.ps2015-04-17 15:57 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_FCfDtO9.fasta2015-04-17 15:36 253 Input query sequence in FASTA format
[ ]jp_FCfDtO9.full_MSA.fasta2015-04-17 15:56 36MFull MSA before JPred filters in FASTA
[TXT]jp_FCfDtO9.full_MSA.fasta.noGaps.html2015-04-17 15:58 3.6MFull MSA before JPred filters in FASTA
[TXT]jp_FCfDtO9.full_MSA.fasta.withGaps.html2015-04-17 15:58 91MFull MSA before JPred filters in FASTA
[ ]jp_FCfDtO9.hmm2015-04-17 15:57 44KHHMer2 profile of the alignment
[TXT]jp_FCfDtO9.html2015-04-17 15:57 437KHTML prediction and alignment data
[ ]jp_FCfDtO9.input2015-04-17 15:31 244 Raw input data for analysis
[ ]jp_FCfDtO9.jalview2015-04-17 15:57 5.6KJalview annotation file for alignment
[ ]jp_FCfDtO9.jnet2015-04-17 15:57 8.7KJnet secondary structure output
[TXT]jp_FCfDtO9.profile2015-04-17 15:49 38KPSIBLAST profile from alignment
[ ]jp_FCfDtO9.pssm2015-04-17 15:57 51KPSIBLAST PSSM for Jnet
[TXT]jp_FCfDtO9.results.html2016-02-15 12:18 103KJPred results page
[TXT]jp_FCfDtO9.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FCfDtO9.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FCfDtO9.seq2015-04-17 15:31 253 Sequence data file
[TXT]jp_FCfDtO9.simple.html2015-04-17 15:57 1.7KBrief HTML: sequence and prediction only
[TXT]jp_FCfDtO9.svg.html2015-04-17 15:59 95KJalview SVG summary of results
[ ]jp_FCfDtO9.tar.gz2015-04-17 15:59 31MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.