A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1vjfa_.name | 2015-04-17 16:57 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_oC4EASR.align | 2015-04-17 18:01 | 181K | PSIBLAST alignment in FASTA format |
| jp_oC4EASR.als | 2015-04-17 18:01 | 3.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_oC4EASR.blast.gz | 2015-04-17 18:00 | 2.7M | Compressed PSIBLAST output file |
| jp_oC4EASR.coils.csv | 2015-04-17 18:01 | 1.0K | COILS output in CSV format |
| jp_oC4EASR.coilseq.lupas_14 | 2015-04-17 18:01 | 7.0K | COILS output, window length 14 |
| jp_oC4EASR.coilseq.lupas_21 | 2015-04-17 18:01 | 7.0K | COILS output, window length 21 |
| jp_oC4EASR.coilseq.lupas_28 | 2015-04-17 18:01 | 7.0K | COILS output, window length 28 |
| jp_oC4EASR.concise | 2015-04-17 18:01 | 355K | Prediction: coiled-coil, solvent, alignment |
| jp_oC4EASR.concise.blc | 2015-04-17 18:01 | 181K | BLC format prediction and alignment data |
| jp_oC4EASR.concise.fasta | 2015-04-17 18:01 | 183K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_oC4EASR.concise.pdf | 2015-04-17 18:02 | 1.2M | PDF prediction and alignment data |
| jp_oC4EASR.concise.ps | 2015-04-17 18:01 | 22M | Prediction: coiled-coil, solvent, alignment |
| jp_oC4EASR.fasta | 2015-04-17 17:55 | 182 | Input query sequence in FASTA format |
| jp_oC4EASR.full_MSA.fasta | 2015-04-17 18:01 | 6.5M | Full MSA before JPred filters in FASTA |
| jp_oC4EASR.full_MSA.fasta.noGaps.html | 2015-04-17 18:02 | 1.7M | Full MSA before JPred filters in FASTA |
| jp_oC4EASR.full_MSA.fasta.withGaps.html | 2015-04-17 18:02 | 28M | Full MSA before JPred filters in FASTA |
| jp_oC4EASR.hmm | 2015-04-17 18:01 | 31K | HHMer2 profile of the alignment |
| jp_oC4EASR.html | 2015-04-17 18:01 | 386K | HTML prediction and alignment data |
| jp_oC4EASR.input | 2015-04-17 16:57 | 174 | Raw input data for analysis |
| jp_oC4EASR.jalview | 2015-04-17 18:01 | 4.2K | Jalview annotation file for alignment |
| jp_oC4EASR.jnet | 2015-04-17 18:01 | 6.1K | Jnet secondary structure output |
| jp_oC4EASR.profile | 2015-04-17 17:58 | 27K | PSIBLAST profile from alignment |
| jp_oC4EASR.pssm | 2015-04-17 18:01 | 36K | PSIBLAST PSSM for Jnet |
| jp_oC4EASR.results.html | 2016-02-15 12:18 | 78K | JPred results page |
| jp_oC4EASR.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_oC4EASR.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_oC4EASR.seq | 2015-04-17 16:57 | 182 | Sequence data file |
| jp_oC4EASR.simple.html | 2015-04-17 18:01 | 1.6K | Brief HTML: sequence and prediction only |
![[TXT]](jp_oC4EASR.svg.html) | jp_oC4EASR.svg.html | 2015-04-17 18:02 | 70K | Jalview SVG summary of results |
| jp_oC4EASR.tar.gz | 2015-04-17 18:02 | 7.0M | Archive containing complete results |
