JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]jp_3REbxSp.als2015-04-17 21:43 2.8KAlscript command file for PS/PDF output
[ ]jp_3REbxSp.tar.gz2015-04-17 21:43 2.0MArchive containing complete results
[ ]jp_3REbxSp.concise.blc2015-04-17 21:43 125KBLC format prediction and alignment data
[TXT]jp_3REbxSp.simple.html2015-04-17 21:43 1.4KBrief HTML: sequence and prediction only
[TXT]jp_3REbxSp.coils.csv2015-04-17 21:43 888 COILS output in CSV format
[ ]jp_3REbxSp.coilseq.lupas_142015-04-17 21:43 6.0KCOILS output, window length 14
[ ]jp_3REbxSp.coilseq.lupas_212015-04-17 21:43 6.0KCOILS output, window length 21
[ ]jp_3REbxSp.coilseq.lupas_282015-04-17 21:43 6.0KCOILS output, window length 28
[ ]jp_3REbxSp.blast.gz2015-04-17 21:42 574KCompressed PSIBLAST output file
[ ]jp_3REbxSp.full_MSA.fasta2015-04-17 21:43 876KFull MSA before JPred filters in FASTA
[TXT]jp_3REbxSp.full_MSA.fasta.noGaps.html2015-04-17 21:43 330KFull MSA before JPred filters in FASTA
[TXT]jp_3REbxSp.full_MSA.fasta.withGaps.html2015-04-17 21:43 3.5MFull MSA before JPred filters in FASTA
[ ]jp_3REbxSp.hmm2015-04-17 21:43 27KHHMer2 profile of the alignment
[TXT]jp_3REbxSp.html2015-04-17 21:43 289KHTML prediction and alignment data
[TXT]jp_3REbxSp.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_3REbxSp.fasta2015-04-17 21:38 157 Input query sequence in FASTA format
[TXT]jp_3REbxSp.results.html2016-02-15 12:18 67KJPred results page
[TXT]LOG2015-04-17 21:43 4.7KJPred server log file
[TXT]jp_3REbxSp.svg.html2015-04-17 21:43 59KJalview SVG summary of results
[ ]jp_3REbxSp.jalview2015-04-17 21:43 3.7KJalview annotation file for alignment
[TXT]jp_3REbxSp.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_3REbxSp.jnet2015-04-17 21:43 5.3KJnet secondary structure output
[TXT]d1vjla_.name2015-04-17 19:13 0 Job name flag file
[ ]jp_3REbxSp.concise.pdf2015-04-17 21:43 886KPDF prediction and alignment data
[ ]jp_3REbxSp.pssm2015-04-17 21:43 31KPSIBLAST PSSM for Jnet
[ ]jp_3REbxSp.align2015-04-17 21:43 124KPSIBLAST alignment in FASTA format
[TXT]jp_3REbxSp.profile2015-04-17 21:42 23KPSIBLAST profile from alignment
[ ]jp_3REbxSp.concise2015-04-17 21:43 244KPrediction: coiled-coil, solvent, alignment
[ ]jp_3REbxSp.concise.fasta2015-04-17 21:43 126KPrediction: coiled-coil, solvent, alignment
[ ]jp_3REbxSp.concise.ps2015-04-17 21:43 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_3REbxSp.input2015-04-17 19:13 150 Raw input data for analysis
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[ ]jp_3REbxSp.seq2015-04-17 19:13 157 Sequence data file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.