JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:43 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vkma_.name2015-04-17 19:13 0 Job name flag file
[ ]jp_HIBAu4E.align2015-04-17 21:42 201KPSIBLAST alignment in FASTA format
[TXT]jp_HIBAu4E.als2015-04-17 21:42 4.4KAlscript command file for PS/PDF output
[ ]jp_HIBAu4E.blast.gz2015-04-17 21:42 961KCompressed PSIBLAST output file
[TXT]jp_HIBAu4E.coils.csv2015-04-17 21:42 1.7KCOILS output in CSV format
[ ]jp_HIBAu4E.coilseq.lupas_142015-04-17 21:42 12KCOILS output, window length 14
[ ]jp_HIBAu4E.coilseq.lupas_212015-04-17 21:42 12KCOILS output, window length 21
[ ]jp_HIBAu4E.coilseq.lupas_282015-04-17 21:42 12KCOILS output, window length 28
[ ]jp_HIBAu4E.concise2015-04-17 21:42 401KPrediction: coiled-coil, solvent, alignment
[ ]jp_HIBAu4E.concise.blc2015-04-17 21:42 202KBLC format prediction and alignment data
[ ]jp_HIBAu4E.concise.fasta2015-04-17 21:42 204KPrediction: coiled-coil, solvent, alignment
[ ]jp_HIBAu4E.concise.pdf2015-04-17 21:42 1.4MPDF prediction and alignment data
[ ]jp_HIBAu4E.concise.ps2015-04-17 21:42 25MPrediction: coiled-coil, solvent, alignment
[ ]jp_HIBAu4E.fasta2015-04-17 21:38 308 Input query sequence in FASTA format
[ ]jp_HIBAu4E.full_MSA.fasta2015-04-17 21:42 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_HIBAu4E.full_MSA.fasta.noGaps.html2015-04-17 21:42 452KFull MSA before JPred filters in FASTA
[TXT]jp_HIBAu4E.full_MSA.fasta.withGaps.html2015-04-17 21:42 5.1MFull MSA before JPred filters in FASTA
[ ]jp_HIBAu4E.hmm2015-04-17 21:42 55KHHMer2 profile of the alignment
[TXT]jp_HIBAu4E.html2015-04-17 21:42 355KHTML prediction and alignment data
[ ]jp_HIBAu4E.input2015-04-17 19:13 298 Raw input data for analysis
[ ]jp_HIBAu4E.jalview2015-04-17 21:42 6.7KJalview annotation file for alignment
[ ]jp_HIBAu4E.jnet2015-04-17 21:42 11KJnet secondary structure output
[TXT]jp_HIBAu4E.profile2015-04-17 21:40 47KPSIBLAST profile from alignment
[ ]jp_HIBAu4E.pssm2015-04-17 21:42 63KPSIBLAST PSSM for Jnet
[TXT]jp_HIBAu4E.results.html2016-02-15 12:18 127KJPred results page
[TXT]jp_HIBAu4E.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_HIBAu4E.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_HIBAu4E.seq2015-04-17 19:13 308 Sequence data file
[TXT]jp_HIBAu4E.simple.html2015-04-17 21:42 2.0KBrief HTML: sequence and prediction only
[TXT]jp_HIBAu4E.svg.html2015-04-17 21:43 119KJalview SVG summary of results
[ ]jp_HIBAu4E.tar.gz2015-04-17 21:43 3.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.