JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vmoa_.name2015-04-17 17:22 0 Job name flag file
[ ]jp_9x9Zd84.align2015-04-17 18:31 162KPSIBLAST alignment in FASTA format
[TXT]jp_9x9Zd84.als2015-04-17 18:31 2.4KAlscript command file for PS/PDF output
[ ]jp_9x9Zd84.blast.gz2015-04-17 18:30 1.8MCompressed PSIBLAST output file
[TXT]jp_9x9Zd84.coils.csv2015-04-17 18:31 1.0KCOILS output in CSV format
[ ]jp_9x9Zd84.coilseq.lupas_142015-04-17 18:31 6.8KCOILS output, window length 14
[ ]jp_9x9Zd84.coilseq.lupas_212015-04-17 18:31 6.8KCOILS output, window length 21
[ ]jp_9x9Zd84.coilseq.lupas_282015-04-17 18:31 6.8KCOILS output, window length 28
[ ]jp_9x9Zd84.concise2015-04-17 18:31 317KPrediction: coiled-coil, solvent, alignment
[ ]jp_9x9Zd84.concise.blc2015-04-17 18:31 162KBLC format prediction and alignment data
[ ]jp_9x9Zd84.concise.fasta2015-04-17 18:31 164KPrediction: coiled-coil, solvent, alignment
[ ]jp_9x9Zd84.concise.pdf2015-04-17 18:31 850KPDF prediction and alignment data
[ ]jp_9x9Zd84.concise.ps2015-04-17 18:31 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_9x9Zd84.fasta2015-04-17 18:27 178 Input query sequence in FASTA format
[ ]jp_9x9Zd84.full_MSA.fasta2015-04-17 18:30 9.7MFull MSA before JPred filters in FASTA
[TXT]jp_9x9Zd84.full_MSA.fasta.noGaps.html2015-04-17 18:31 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_9x9Zd84.full_MSA.fasta.withGaps.html2015-04-17 18:31 24MFull MSA before JPred filters in FASTA
[ ]jp_9x9Zd84.hmm2015-04-17 18:31 31KHHMer2 profile of the alignment
[TXT]jp_9x9Zd84.html2015-04-17 18:31 344KHTML prediction and alignment data
[ ]jp_9x9Zd84.input2015-04-17 17:22 170 Raw input data for analysis
[ ]jp_9x9Zd84.jalview2015-04-17 18:31 4.0KJalview annotation file for alignment
[ ]jp_9x9Zd84.jnet2015-04-17 18:31 6.0KJnet secondary structure output
[TXT]jp_9x9Zd84.profile2015-04-17 18:29 26KPSIBLAST profile from alignment
[ ]jp_9x9Zd84.pssm2015-04-17 18:31 35KPSIBLAST PSSM for Jnet
[TXT]jp_9x9Zd84.results.html2016-02-15 12:18 72KJPred results page
[TXT]jp_9x9Zd84.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_9x9Zd84.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_9x9Zd84.seq2015-04-17 17:22 178 Sequence data file
[TXT]jp_9x9Zd84.simple.html2015-04-17 18:31 1.4KBrief HTML: sequence and prediction only
[TXT]jp_9x9Zd84.svg.html2015-04-17 18:32 63KJalview SVG summary of results
[ ]jp_9x9Zd84.tar.gz2015-04-17 18:32 4.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.