JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:43 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vp8a_.name2015-04-17 19:14 0 Job name flag file
[ ]jp_rXeQMXB.align2015-04-17 21:42 26KPSIBLAST alignment in FASTA format
[TXT]jp_rXeQMXB.als2015-04-17 21:42 3.4KAlscript command file for PS/PDF output
[ ]jp_rXeQMXB.blast.gz2015-04-17 21:42 76KCompressed PSIBLAST output file
[TXT]jp_rXeQMXB.coils.csv2015-04-17 21:42 1.1KCOILS output in CSV format
[ ]jp_rXeQMXB.coilseq.lupas_142015-04-17 21:42 8.0KCOILS output, window length 14
[ ]jp_rXeQMXB.coilseq.lupas_212015-04-17 21:42 8.0KCOILS output, window length 21
[ ]jp_rXeQMXB.coilseq.lupas_282015-04-17 21:42 8.0KCOILS output, window length 28
[ ]jp_rXeQMXB.concise2015-04-17 21:42 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_rXeQMXB.concise.blc2015-04-17 21:42 28KBLC format prediction and alignment data
[ ]jp_rXeQMXB.concise.fasta2015-04-17 21:42 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_rXeQMXB.concise.pdf2015-04-17 21:42 192KPDF prediction and alignment data
[ ]jp_rXeQMXB.concise.ps2015-04-17 21:42 3.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_rXeQMXB.fasta2015-04-17 21:39 205 Input query sequence in FASTA format
[ ]jp_rXeQMXB.full_MSA.fasta2015-04-17 21:42 71KFull MSA before JPred filters in FASTA
[TXT]jp_rXeQMXB.full_MSA.fasta.noGaps.html2015-04-17 21:42 59KFull MSA before JPred filters in FASTA
[TXT]jp_rXeQMXB.full_MSA.fasta.withGaps.html2015-04-17 21:42 308KFull MSA before JPred filters in FASTA
[ ]jp_rXeQMXB.hmm2015-04-17 21:42 36KHHMer2 profile of the alignment
[TXT]jp_rXeQMXB.html2015-04-17 21:42 71KHTML prediction and alignment data
[ ]jp_rXeQMXB.input2015-04-17 19:14 197 Raw input data for analysis
[ ]jp_rXeQMXB.jalview2015-04-17 21:42 4.7KJalview annotation file for alignment
[ ]jp_rXeQMXB.jnet2015-04-17 21:42 7.0KJnet secondary structure output
[TXT]jp_rXeQMXB.profile2015-04-17 21:41 31KPSIBLAST profile from alignment
[ ]jp_rXeQMXB.pssm2015-04-17 21:42 41KPSIBLAST PSSM for Jnet
[TXT]jp_rXeQMXB.results.html2016-02-15 12:18 86KJPred results page
[TXT]jp_rXeQMXB.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_rXeQMXB.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_rXeQMXB.seq2015-04-17 19:14 205 Sequence data file
[TXT]jp_rXeQMXB.simple.html2015-04-17 21:42 1.6KBrief HTML: sequence and prediction only
[TXT]jp_rXeQMXB.svg.html2015-04-17 21:43 78KJalview SVG summary of results
[ ]jp_rXeQMXB.tar.gz2015-04-17 21:43 396KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.