JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:45 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vpqa_.name2015-04-17 15:32 0 Job name flag file
[ ]jp_0j_TYS5.align2015-04-17 15:44 271KPSIBLAST alignment in FASTA format
[TXT]jp_0j_TYS5.als2015-04-17 15:44 3.7KAlscript command file for PS/PDF output
[ ]jp_0j_TYS5.blast.gz2015-04-17 15:43 3.8MCompressed PSIBLAST output file
[TXT]jp_0j_TYS5.coils.csv2015-04-17 15:44 1.6KCOILS output in CSV format
[ ]jp_0j_TYS5.coilseq.lupas_142015-04-17 15:44 11KCOILS output, window length 14
[ ]jp_0j_TYS5.coilseq.lupas_212015-04-17 15:44 11KCOILS output, window length 21
[ ]jp_0j_TYS5.coilseq.lupas_282015-04-17 15:44 11KCOILS output, window length 28
[ ]jp_0j_TYS5.concise2015-04-17 15:44 536KPrediction: coiled-coil, solvent, alignment
[ ]jp_0j_TYS5.concise.blc2015-04-17 15:44 271KBLC format prediction and alignment data
[ ]jp_0j_TYS5.concise.fasta2015-04-17 15:44 274KPrediction: coiled-coil, solvent, alignment
[ ]jp_0j_TYS5.concise.pdf2015-04-17 15:45 1.9MPDF prediction and alignment data
[ ]jp_0j_TYS5.concise.ps2015-04-17 15:44 34MPrediction: coiled-coil, solvent, alignment
[ ]jp_0j_TYS5.fasta2015-04-17 15:37 276 Input query sequence in FASTA format
[ ]jp_0j_TYS5.full_MSA.fasta2015-04-17 15:43 6.5MFull MSA before JPred filters in FASTA
[TXT]jp_0j_TYS5.full_MSA.fasta.noGaps.html2015-04-17 15:45 948KFull MSA before JPred filters in FASTA
[TXT]jp_0j_TYS5.full_MSA.fasta.withGaps.html2015-04-17 15:45 19MFull MSA before JPred filters in FASTA
[ ]jp_0j_TYS5.hmm2015-04-17 15:44 49KHHMer2 profile of the alignment
[TXT]jp_0j_TYS5.html2015-04-17 15:44 482KHTML prediction and alignment data
[ ]jp_0j_TYS5.input2015-04-17 15:32 267 Raw input data for analysis
[ ]jp_0j_TYS5.jalview2015-04-17 15:44 6.0KJalview annotation file for alignment
[ ]jp_0j_TYS5.jnet2015-04-17 15:44 9.5KJnet secondary structure output
[TXT]jp_0j_TYS5.profile2015-04-17 15:41 42KPSIBLAST profile from alignment
[ ]jp_0j_TYS5.pssm2015-04-17 15:44 56KPSIBLAST PSSM for Jnet
[TXT]jp_0j_TYS5.results.html2016-02-15 12:18 112KJPred results page
[TXT]jp_0j_TYS5.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_0j_TYS5.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_0j_TYS5.seq2015-04-17 15:32 276 Sequence data file
[TXT]jp_0j_TYS5.simple.html2015-04-17 15:44 1.8KBrief HTML: sequence and prediction only
[TXT]jp_0j_TYS5.svg.html2015-04-17 15:45 104KJalview SVG summary of results
[ ]jp_0j_TYS5.tar.gz2015-04-17 15:45 8.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.