A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:38 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1vq8p1.name | 2015-04-17 18:36 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_l7_t7vw.align | 2015-04-17 20:38 | 43K | PSIBLAST alignment in FASTA format |
| jp_l7_t7vw.als | 2015-04-17 20:38 | 2.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_l7_t7vw.blast.gz | 2015-04-17 20:38 | 204K | Compressed PSIBLAST output file |
| jp_l7_t7vw.coils.csv | 2015-04-17 20:38 | 888 | COILS output in CSV format |
| jp_l7_t7vw.coilseq.lupas_14 | 2015-04-17 20:38 | 6.0K | COILS output, window length 14 |
| jp_l7_t7vw.coilseq.lupas_21 | 2015-04-17 20:38 | 6.0K | COILS output, window length 21 |
| jp_l7_t7vw.coilseq.lupas_28 | 2015-04-17 20:38 | 6.0K | COILS output, window length 28 |
| jp_l7_t7vw.concise | 2015-04-17 20:38 | 88K | Prediction: coiled-coil, solvent, alignment |
| jp_l7_t7vw.concise.blc | 2015-04-17 20:38 | 44K | BLC format prediction and alignment data |
| jp_l7_t7vw.concise.fasta | 2015-04-17 20:38 | 44K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_l7_t7vw.concise.pdf | 2015-04-17 20:38 | 280K | PDF prediction and alignment data |
| jp_l7_t7vw.concise.ps | 2015-04-17 20:38 | 5.2M | Prediction: coiled-coil, solvent, alignment |
| jp_l7_t7vw.fasta | 2015-04-17 20:34 | 157 | Input query sequence in FASTA format |
| jp_l7_t7vw.full_MSA.fasta | 2015-04-17 20:38 | 262K | Full MSA before JPred filters in FASTA |
| jp_l7_t7vw.full_MSA.fasta.noGaps.html | 2015-04-17 20:38 | 180K | Full MSA before JPred filters in FASTA |
| jp_l7_t7vw.full_MSA.fasta.withGaps.html | 2015-04-17 20:38 | 964K | Full MSA before JPred filters in FASTA |
| jp_l7_t7vw.hmm | 2015-04-17 20:38 | 27K | HHMer2 profile of the alignment |
| jp_l7_t7vw.html | 2015-04-17 20:38 | 110K | HTML prediction and alignment data |
| jp_l7_t7vw.input | 2015-04-17 18:36 | 150 | Raw input data for analysis |
| jp_l7_t7vw.jalview | 2015-04-17 20:38 | 3.7K | Jalview annotation file for alignment |
| jp_l7_t7vw.jnet | 2015-04-17 20:38 | 5.3K | Jnet secondary structure output |
| jp_l7_t7vw.profile | 2015-04-17 20:37 | 23K | PSIBLAST profile from alignment |
| jp_l7_t7vw.pssm | 2015-04-17 20:38 | 31K | PSIBLAST PSSM for Jnet |
| jp_l7_t7vw.results.html | 2016-02-15 12:18 | 67K | JPred results page |
| jp_l7_t7vw.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_l7_t7vw.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_l7_t7vw.seq | 2015-04-17 18:36 | 157 | Sequence data file |
| jp_l7_t7vw.simple.html | 2015-04-17 20:38 | 1.4K | Brief HTML: sequence and prediction only |
![[TXT]](jp_l7_t7vw.svg.html) | jp_l7_t7vw.svg.html | 2015-04-17 20:38 | 59K | Jalview SVG summary of results |
| jp_l7_t7vw.tar.gz | 2015-04-17 20:38 | 673K | Archive containing complete results |
