JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:37 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vq8v1.name2015-04-17 18:36 0 Job name flag file
[ ]jp_bJ8mcr7.align2015-04-17 20:37 58KPSIBLAST alignment in FASTA format
[TXT]jp_bJ8mcr7.als2015-04-17 20:37 1.6KAlscript command file for PS/PDF output
[ ]jp_bJ8mcr7.blast.gz2015-04-17 20:36 258KCompressed PSIBLAST output file
[TXT]jp_bJ8mcr7.coils.csv2015-04-17 20:37 420 COILS output in CSV format
[ ]jp_bJ8mcr7.coilseq.lupas_142015-04-17 20:37 2.7KCOILS output, window length 14
[ ]jp_bJ8mcr7.coilseq.lupas_212015-04-17 20:37 2.7KCOILS output, window length 21
[ ]jp_bJ8mcr7.coilseq.lupas_282015-04-17 20:37 2.7KCOILS output, window length 28
[ ]jp_bJ8mcr7.concise2015-04-17 20:37 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_bJ8mcr7.concise.blc2015-04-17 20:37 58KBLC format prediction and alignment data
[ ]jp_bJ8mcr7.concise.fasta2015-04-17 20:37 59KPrediction: coiled-coil, solvent, alignment
[ ]jp_bJ8mcr7.concise.pdf2015-04-17 20:37 337KPDF prediction and alignment data
[ ]jp_bJ8mcr7.concise.ps2015-04-17 20:37 6.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_bJ8mcr7.fasta2015-04-17 20:34 78 Input query sequence in FASTA format
[ ]jp_bJ8mcr7.full_MSA.fasta2015-04-17 20:36 310KFull MSA before JPred filters in FASTA
[TXT]jp_bJ8mcr7.full_MSA.fasta.noGaps.html2015-04-17 20:37 462KFull MSA before JPred filters in FASTA
[TXT]jp_bJ8mcr7.full_MSA.fasta.withGaps.html2015-04-17 20:37 1.8MFull MSA before JPred filters in FASTA
[ ]jp_bJ8mcr7.hmm2015-04-17 20:37 12KHHMer2 profile of the alignment
[TXT]jp_bJ8mcr7.html2015-04-17 20:37 202KHTML prediction and alignment data
[ ]jp_bJ8mcr7.input2015-04-17 18:36 72 Raw input data for analysis
[ ]jp_bJ8mcr7.jalview2015-04-17 20:37 2.2KJalview annotation file for alignment
[ ]jp_bJ8mcr7.jnet2015-04-17 20:37 2.5KJnet secondary structure output
[TXT]jp_bJ8mcr7.profile2015-04-17 20:36 11KPSIBLAST profile from alignment
[ ]jp_bJ8mcr7.pssm2015-04-17 20:37 14KPSIBLAST PSSM for Jnet
[TXT]jp_bJ8mcr7.results.html2016-02-15 12:18 36KJPred results page
[TXT]jp_bJ8mcr7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_bJ8mcr7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_bJ8mcr7.seq2015-04-17 18:36 78 Sequence data file
[TXT]jp_bJ8mcr7.simple.html2015-04-17 20:37 1.0KBrief HTML: sequence and prediction only
[TXT]jp_bJ8mcr7.svg.html2015-04-17 20:37 28KJalview SVG summary of results
[ ]jp_bJ8mcr7.tar.gz2015-04-17 20:37 940KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.