JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1vr0a1.name2015-04-17 18:00 0 Job name flag file
[ ]jp_xookypV.align2015-04-17 19:38 161KPSIBLAST alignment in FASTA format
[TXT]jp_xookypV.als2015-04-17 19:38 4.1KAlscript command file for PS/PDF output
[ ]jp_xookypV.blast.gz2015-04-17 19:38 721KCompressed PSIBLAST output file
[TXT]jp_xookypV.coils.csv2015-04-17 19:38 1.4KCOILS output in CSV format
[ ]jp_xookypV.coilseq.lupas_142015-04-17 19:38 9.9KCOILS output, window length 14
[ ]jp_xookypV.coilseq.lupas_212015-04-17 19:38 9.9KCOILS output, window length 21
[ ]jp_xookypV.coilseq.lupas_282015-04-17 19:38 9.9KCOILS output, window length 28
[ ]jp_xookypV.concise2015-04-17 19:38 320KPrediction: coiled-coil, solvent, alignment
[ ]jp_xookypV.concise.blc2015-04-17 19:38 162KBLC format prediction and alignment data
[ ]jp_xookypV.concise.fasta2015-04-17 19:38 163KPrediction: coiled-coil, solvent, alignment
[ ]jp_xookypV.concise.pdf2015-04-17 19:39 1.1MPDF prediction and alignment data
[ ]jp_xookypV.concise.ps2015-04-17 19:38 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_xookypV.fasta2015-04-17 19:34 251 Input query sequence in FASTA format
[ ]jp_xookypV.full_MSA.fasta2015-04-17 19:38 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_xookypV.full_MSA.fasta.noGaps.html2015-04-17 19:39 305KFull MSA before JPred filters in FASTA
[TXT]jp_xookypV.full_MSA.fasta.withGaps.html2015-04-17 19:39 4.3MFull MSA before JPred filters in FASTA
[ ]jp_xookypV.hmm2015-04-17 19:38 44KHHMer2 profile of the alignment
[TXT]jp_xookypV.html2015-04-17 19:38 307KHTML prediction and alignment data
[ ]jp_xookypV.input2015-04-17 18:00 242 Raw input data for analysis
[ ]jp_xookypV.jalview2015-04-17 19:38 5.6KJalview annotation file for alignment
[ ]jp_xookypV.jnet2015-04-17 19:38 8.6KJnet secondary structure output
[TXT]jp_xookypV.profile2015-04-17 19:37 38KPSIBLAST profile from alignment
[ ]jp_xookypV.pssm2015-04-17 19:38 50KPSIBLAST PSSM for Jnet
[TXT]jp_xookypV.results.html2016-02-15 12:18 105KJPred results page
[TXT]jp_xookypV.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_xookypV.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_xookypV.seq2015-04-17 18:00 251 Sequence data file
[TXT]jp_xookypV.simple.html2015-04-17 19:38 1.8KBrief HTML: sequence and prediction only
[TXT]jp_xookypV.svg.html2015-04-17 19:39 97KJalview SVG summary of results
[ ]jp_xookypV.tar.gz2015-04-17 19:39 2.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.