JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:11 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1vrma1.name2015-04-17 16:10 0 Job name flag file
[ ]jp_fF8OqoC.align2015-04-17 17:09 355KPSIBLAST alignment in FASTA format
[TXT]jp_fF8OqoC.als2015-04-17 17:09 5.3KAlscript command file for PS/PDF output
[ ]jp_fF8OqoC.blast.gz2015-04-17 17:07 7.4MCompressed PSIBLAST output file
[TXT]jp_fF8OqoC.coils.csv2015-04-17 17:09 1.8KCOILS output in CSV format
[ ]jp_fF8OqoC.coilseq.lupas_142015-04-17 17:09 13KCOILS output, window length 14
[ ]jp_fF8OqoC.coilseq.lupas_212015-04-17 17:09 13KCOILS output, window length 21
[ ]jp_fF8OqoC.coilseq.lupas_282015-04-17 17:09 13KCOILS output, window length 28
[ ]jp_fF8OqoC.concise2015-04-17 17:09 702KPrediction: coiled-coil, solvent, alignment
[ ]jp_fF8OqoC.concise.blc2015-04-17 17:09 354KBLC format prediction and alignment data
[ ]jp_fF8OqoC.concise.fasta2015-04-17 17:09 358KPrediction: coiled-coil, solvent, alignment
[ ]jp_fF8OqoC.concise.pdf2015-04-17 17:10 2.5MPDF prediction and alignment data
[ ]jp_fF8OqoC.concise.ps2015-04-17 17:09 45MPrediction: coiled-coil, solvent, alignment
[ ]jp_fF8OqoC.fasta2015-04-17 16:35 326 Input query sequence in FASTA format
[ ]jp_fF8OqoC.full_MSA.fasta2015-04-17 17:08 12MFull MSA before JPred filters in FASTA
[TXT]jp_fF8OqoC.full_MSA.fasta.noGaps.html2015-04-17 17:10 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_fF8OqoC.full_MSA.fasta.withGaps.html2015-04-17 17:10 37MFull MSA before JPred filters in FASTA
[ ]jp_fF8OqoC.hmm2015-04-17 17:09 58KHHMer2 profile of the alignment
[TXT]jp_fF8OqoC.html2015-04-17 17:09 592KHTML prediction and alignment data
[ ]jp_fF8OqoC.input2015-04-17 16:10 316 Raw input data for analysis
[ ]jp_fF8OqoC.jalview2015-04-17 17:09 7.0KJalview annotation file for alignment
[ ]jp_fF8OqoC.jnet2015-04-17 17:09 11KJnet secondary structure output
[TXT]jp_fF8OqoC.profile2015-04-17 17:01 49KPSIBLAST profile from alignment
[ ]jp_fF8OqoC.pssm2015-04-17 17:09 66KPSIBLAST PSSM for Jnet
[TXT]jp_fF8OqoC.results.html2016-02-15 12:19 134KJPred results page
[TXT]jp_fF8OqoC.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fF8OqoC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fF8OqoC.seq2015-04-17 16:10 326 Sequence data file
[TXT]jp_fF8OqoC.simple.html2015-04-17 17:09 2.1KBrief HTML: sequence and prediction only
[TXT]jp_fF8OqoC.svg.html2015-04-17 17:11 126KJalview SVG summary of results
[ ]jp_fF8OqoC.tar.gz2015-04-17 17:11 15MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.