JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:42 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1vzya1.name2015-04-17 15:32 0 Job name flag file
[ ]jp_PJ8iK98.align2015-04-17 15:41 193KPSIBLAST alignment in FASTA format
[TXT]jp_PJ8iK98.als2015-04-17 15:41 4.0KAlscript command file for PS/PDF output
[ ]jp_PJ8iK98.blast.gz2015-04-17 15:41 1.7MCompressed PSIBLAST output file
[TXT]jp_PJ8iK98.coils.csv2015-04-17 15:41 1.4KCOILS output in CSV format
[ ]jp_PJ8iK98.coilseq.lupas_142015-04-17 15:41 9.8KCOILS output, window length 14
[ ]jp_PJ8iK98.coilseq.lupas_212015-04-17 15:41 9.8KCOILS output, window length 21
[ ]jp_PJ8iK98.coilseq.lupas_282015-04-17 15:41 9.8KCOILS output, window length 28
[ ]jp_PJ8iK98.concise2015-04-17 15:41 382KPrediction: coiled-coil, solvent, alignment
[ ]jp_PJ8iK98.concise.blc2015-04-17 15:41 193KBLC format prediction and alignment data
[ ]jp_PJ8iK98.concise.fasta2015-04-17 15:41 195KPrediction: coiled-coil, solvent, alignment
[ ]jp_PJ8iK98.concise.pdf2015-04-17 15:42 1.4MPDF prediction and alignment data
[ ]jp_PJ8iK98.concise.ps2015-04-17 15:41 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_PJ8iK98.fasta2015-04-17 15:37 249 Input query sequence in FASTA format
[ ]jp_PJ8iK98.full_MSA.fasta2015-04-17 15:41 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_PJ8iK98.full_MSA.fasta.noGaps.html2015-04-17 15:42 776KFull MSA before JPred filters in FASTA
[TXT]jp_PJ8iK98.full_MSA.fasta.withGaps.html2015-04-17 15:42 12MFull MSA before JPred filters in FASTA
[ ]jp_PJ8iK98.hmm2015-04-17 15:41 44KHHMer2 profile of the alignment
[TXT]jp_PJ8iK98.html2015-04-17 15:41 363KHTML prediction and alignment data
[ ]jp_PJ8iK98.input2015-04-17 15:32 240 Raw input data for analysis
[ ]jp_PJ8iK98.jalview2015-04-17 15:41 5.5KJalview annotation file for alignment
[ ]jp_PJ8iK98.jnet2015-04-17 15:41 8.5KJnet secondary structure output
[TXT]jp_PJ8iK98.profile2015-04-17 15:40 37KPSIBLAST profile from alignment
[ ]jp_PJ8iK98.pssm2015-04-17 15:41 50KPSIBLAST PSSM for Jnet
[TXT]jp_PJ8iK98.results.html2016-02-15 12:19 103KJPred results page
[TXT]jp_PJ8iK98.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_PJ8iK98.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_PJ8iK98.seq2015-04-17 15:32 249 Sequence data file
[TXT]jp_PJ8iK98.simple.html2015-04-17 15:41 1.8KBrief HTML: sequence and prediction only
[TXT]jp_PJ8iK98.svg.html2015-04-17 15:42 95KJalview SVG summary of results
[ ]jp_PJ8iK98.tar.gz2015-04-17 15:42 4.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.