JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:59 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1w53a_.name2015-04-17 16:11 0 Job name flag file
[ ]jp_irXu5BY.align2015-04-17 16:58 14KPSIBLAST alignment in FASTA format
[TXT]jp_irXu5BY.als2015-04-17 16:58 1.8KAlscript command file for PS/PDF output
[ ]jp_irXu5BY.blast.gz2015-04-17 16:58 35KCompressed PSIBLAST output file
[TXT]jp_irXu5BY.coils.csv2015-04-17 16:58 534 COILS output in CSV format
[ ]jp_irXu5BY.coilseq.lupas_142015-04-17 16:58 3.5KCOILS output, window length 14
[ ]jp_irXu5BY.coilseq.lupas_212015-04-17 16:58 3.5KCOILS output, window length 21
[ ]jp_irXu5BY.coilseq.lupas_282015-04-17 16:58 3.5KCOILS output, window length 28
[ ]jp_irXu5BY.concise2015-04-17 16:58 30KPrediction: coiled-coil, solvent, alignment
[ ]jp_irXu5BY.concise.blc2015-04-17 16:58 15KBLC format prediction and alignment data
[ ]jp_irXu5BY.concise.fasta2015-04-17 16:58 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_irXu5BY.concise.pdf2015-04-17 16:59 101KPDF prediction and alignment data
[ ]jp_irXu5BY.concise.ps2015-04-17 16:58 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_irXu5BY.fasta2015-04-17 16:35 98 Input query sequence in FASTA format
[ ]jp_irXu5BY.full_MSA.fasta2015-04-17 16:58 37KFull MSA before JPred filters in FASTA
[TXT]jp_irXu5BY.full_MSA.fasta.noGaps.html2015-04-17 16:59 40KFull MSA before JPred filters in FASTA
[TXT]jp_irXu5BY.full_MSA.fasta.withGaps.html2015-04-17 16:59 194KFull MSA before JPred filters in FASTA
[ ]jp_irXu5BY.hmm2015-04-17 16:58 16KHHMer2 profile of the alignment
[TXT]jp_irXu5BY.html2015-04-17 16:58 53KHTML prediction and alignment data
[ ]jp_irXu5BY.input2015-04-17 16:11 91 Raw input data for analysis
[ ]jp_irXu5BY.jalview2015-04-17 16:58 2.6KJalview annotation file for alignment
[ ]jp_irXu5BY.jnet2015-04-17 16:58 3.1KJnet secondary structure output
[TXT]jp_irXu5BY.profile2015-04-17 16:56 14KPSIBLAST profile from alignment
[ ]jp_irXu5BY.pssm2015-04-17 16:58 18KPSIBLAST PSSM for Jnet
[TXT]jp_irXu5BY.results.html2016-02-15 12:19 43KJPred results page
[TXT]jp_irXu5BY.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_irXu5BY.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_irXu5BY.seq2015-04-17 16:11 98 Sequence data file
[TXT]jp_irXu5BY.simple.html2015-04-17 16:58 1.1KBrief HTML: sequence and prediction only
[TXT]jp_irXu5BY.svg.html2015-04-17 16:59 35KJalview SVG summary of results
[ ]jp_irXu5BY.tar.gz2015-04-17 16:59 208KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.