JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:36 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1w85i_.name2015-04-17 16:46 0 Job name flag file
[ ]jp_mUzAWFv.align2015-04-17 17:36 45KPSIBLAST alignment in FASTA format
[TXT]jp_mUzAWFv.als2015-04-17 17:36 1.7KAlscript command file for PS/PDF output
[ ]jp_mUzAWFv.blast.gz2015-04-17 17:36 842KCompressed PSIBLAST output file
[TXT]jp_mUzAWFv.coils.csv2015-04-17 17:36 282 COILS output in CSV format
[ ]jp_mUzAWFv.coilseq.lupas_142015-04-17 17:36 1.8KCOILS output, window length 14
[ ]jp_mUzAWFv.coilseq.lupas_212015-04-17 17:36 1.8KCOILS output, window length 21
[ ]jp_mUzAWFv.coilseq.lupas_282015-04-17 17:36 1.8KCOILS output, window length 28
[ ]jp_mUzAWFv.concise2015-04-17 17:36 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_mUzAWFv.concise.blc2015-04-17 17:36 45KBLC format prediction and alignment data
[ ]jp_mUzAWFv.concise.fasta2015-04-17 17:36 45KPrediction: coiled-coil, solvent, alignment
[ ]jp_mUzAWFv.concise.pdf2015-04-17 17:36 250KPDF prediction and alignment data
[ ]jp_mUzAWFv.concise.ps2015-04-17 17:36 4.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_mUzAWFv.fasta2015-04-17 17:33 55 Input query sequence in FASTA format
[ ]jp_mUzAWFv.full_MSA.fasta2015-04-17 17:36 1.1MFull MSA before JPred filters in FASTA
[TXT]jp_mUzAWFv.full_MSA.fasta.noGaps.html2015-04-17 17:36 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_mUzAWFv.full_MSA.fasta.withGaps.html2015-04-17 17:36 6.4MFull MSA before JPred filters in FASTA
[ ]jp_mUzAWFv.hmm2015-04-17 17:36 7.9KHHMer2 profile of the alignment
[TXT]jp_mUzAWFv.html2015-04-17 17:36 194KHTML prediction and alignment data
[ ]jp_mUzAWFv.input2015-04-17 16:46 49 Raw input data for analysis
[ ]jp_mUzAWFv.jalview2015-04-17 17:36 1.7KJalview annotation file for alignment
[ ]jp_mUzAWFv.jnet2015-04-17 17:36 1.6KJnet secondary structure output
[TXT]jp_mUzAWFv.profile2015-04-17 17:35 7.2KPSIBLAST profile from alignment
[ ]jp_mUzAWFv.pssm2015-04-17 17:36 9.0KPSIBLAST PSSM for Jnet
[TXT]jp_mUzAWFv.results.html2016-02-15 12:19 28KJPred results page
[TXT]jp_mUzAWFv.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mUzAWFv.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mUzAWFv.seq2015-04-17 16:46 55 Sequence data file
[TXT]jp_mUzAWFv.simple.html2015-04-17 17:36 1.0KBrief HTML: sequence and prediction only
[TXT]jp_mUzAWFv.svg.html2015-04-17 17:36 20KJalview SVG summary of results
[ ]jp_mUzAWFv.tar.gz2015-04-17 17:36 1.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.