JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wd3a2.name2015-04-17 15:33 0 Job name flag file
[ ]jp_T3VQJez.align2015-04-17 15:44 135KPSIBLAST alignment in FASTA format
[TXT]jp_T3VQJez.als2015-04-17 15:44 3.2KAlscript command file for PS/PDF output
[ ]jp_T3VQJez.blast.gz2015-04-17 15:43 594KCompressed PSIBLAST output file
[TXT]jp_T3VQJez.coils.csv2015-04-17 15:44 1.0KCOILS output in CSV format
[ ]jp_T3VQJez.coilseq.lupas_142015-04-17 15:44 6.8KCOILS output, window length 14
[ ]jp_T3VQJez.coilseq.lupas_212015-04-17 15:44 6.8KCOILS output, window length 21
[ ]jp_T3VQJez.coilseq.lupas_282015-04-17 15:44 6.8KCOILS output, window length 28
[ ]jp_T3VQJez.concise2015-04-17 15:44 265KPrediction: coiled-coil, solvent, alignment
[ ]jp_T3VQJez.concise.blc2015-04-17 15:44 135KBLC format prediction and alignment data
[ ]jp_T3VQJez.concise.fasta2015-04-17 15:44 138KPrediction: coiled-coil, solvent, alignment
[ ]jp_T3VQJez.concise.pdf2015-04-17 15:44 708KPDF prediction and alignment data
[ ]jp_T3VQJez.concise.ps2015-04-17 15:44 15MPrediction: coiled-coil, solvent, alignment
[ ]jp_T3VQJez.fasta2015-04-17 15:39 177 Input query sequence in FASTA format
[ ]jp_T3VQJez.full_MSA.fasta2015-04-17 15:43 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_T3VQJez.full_MSA.fasta.noGaps.html2015-04-17 15:44 335KFull MSA before JPred filters in FASTA
[TXT]jp_T3VQJez.full_MSA.fasta.withGaps.html2015-04-17 15:44 5.5MFull MSA before JPred filters in FASTA
[ ]jp_T3VQJez.hmm2015-04-17 15:44 30KHHMer2 profile of the alignment
[TXT]jp_T3VQJez.html2015-04-17 15:44 292KHTML prediction and alignment data
[ ]jp_T3VQJez.input2015-04-17 15:33 169 Raw input data for analysis
[ ]jp_T3VQJez.jalview2015-04-17 15:44 4.0KJalview annotation file for alignment
[ ]jp_T3VQJez.jnet2015-04-17 15:44 6.0KJnet secondary structure output
[TXT]jp_T3VQJez.profile2015-04-17 15:42 26KPSIBLAST profile from alignment
[ ]jp_T3VQJez.pssm2015-04-17 15:44 35KPSIBLAST PSSM for Jnet
[TXT]jp_T3VQJez.results.html2016-02-15 12:19 74KJPred results page
[TXT]jp_T3VQJez.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_T3VQJez.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_T3VQJez.seq2015-04-17 15:33 177 Sequence data file
[TXT]jp_T3VQJez.simple.html2015-04-17 15:44 1.5KBrief HTML: sequence and prediction only
[TXT]jp_T3VQJez.svg.html2015-04-17 15:44 66KJalview SVG summary of results
[ ]jp_T3VQJez.tar.gz2015-04-17 15:44 1.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.