JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1weha_.name2015-04-17 18:37 0 Job name flag file
[ ]jp_Ktb_fXv.align2015-04-17 20:42 179KPSIBLAST alignment in FASTA format
[TXT]jp_Ktb_fXv.als2015-04-17 20:42 3.2KAlscript command file for PS/PDF output
[ ]jp_Ktb_fXv.blast.gz2015-04-17 20:41 5.4MCompressed PSIBLAST output file
[TXT]jp_Ktb_fXv.coils.csv2015-04-17 20:42 1.0KCOILS output in CSV format
[ ]jp_Ktb_fXv.coilseq.lupas_142015-04-17 20:42 7.2KCOILS output, window length 14
[ ]jp_Ktb_fXv.coilseq.lupas_212015-04-17 20:42 7.2KCOILS output, window length 21
[ ]jp_Ktb_fXv.coilseq.lupas_282015-04-17 20:42 7.2KCOILS output, window length 28
[ ]jp_Ktb_fXv.concise2015-04-17 20:42 350KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ktb_fXv.concise.blc2015-04-17 20:42 178KBLC format prediction and alignment data
[ ]jp_Ktb_fXv.concise.fasta2015-04-17 20:42 180KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ktb_fXv.concise.pdf2015-04-17 20:43 1.2MPDF prediction and alignment data
[ ]jp_Ktb_fXv.concise.ps2015-04-17 20:42 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_Ktb_fXv.fasta2015-04-17 20:35 186 Input query sequence in FASTA format
[ ]jp_Ktb_fXv.full_MSA.fasta2015-04-17 20:41 13MFull MSA before JPred filters in FASTA
[TXT]jp_Ktb_fXv.full_MSA.fasta.noGaps.html2015-04-17 20:43 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_Ktb_fXv.full_MSA.fasta.withGaps.html2015-04-17 20:43 32MFull MSA before JPred filters in FASTA
[ ]jp_Ktb_fXv.hmm2015-04-17 20:42 32KHHMer2 profile of the alignment
[TXT]jp_Ktb_fXv.html2015-04-17 20:42 378KHTML prediction and alignment data
[ ]jp_Ktb_fXv.input2015-04-17 18:37 178 Raw input data for analysis
[ ]jp_Ktb_fXv.jalview2015-04-17 20:42 4.3KJalview annotation file for alignment
[ ]jp_Ktb_fXv.jnet2015-04-17 20:42 6.3KJnet secondary structure output
[TXT]jp_Ktb_fXv.profile2015-04-17 20:39 28KPSIBLAST profile from alignment
[ ]jp_Ktb_fXv.pssm2015-04-17 20:42 37KPSIBLAST PSSM for Jnet
[TXT]jp_Ktb_fXv.results.html2016-02-15 12:19 79KJPred results page
[TXT]jp_Ktb_fXv.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Ktb_fXv.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Ktb_fXv.seq2015-04-17 18:37 186 Sequence data file
[TXT]jp_Ktb_fXv.simple.html2015-04-17 20:42 1.6KBrief HTML: sequence and prediction only
[TXT]jp_Ktb_fXv.svg.html2015-04-17 20:43 71KJalview SVG summary of results
[ ]jp_Ktb_fXv.tar.gz2015-04-17 20:43 10MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.