JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:40 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wjxa_.name2015-04-17 16:46 0 Job name flag file
[ ]jp_h4MDDaN.align2015-04-17 17:39 109KPSIBLAST alignment in FASTA format
[TXT]jp_h4MDDaN.als2015-04-17 17:39 2.4KAlscript command file for PS/PDF output
[ ]jp_h4MDDaN.blast.gz2015-04-17 17:38 1.0MCompressed PSIBLAST output file
[TXT]jp_h4MDDaN.coils.csv2015-04-17 17:39 702 COILS output in CSV format
[ ]jp_h4MDDaN.coilseq.lupas_142015-04-17 17:39 4.7KCOILS output, window length 14
[ ]jp_h4MDDaN.coilseq.lupas_212015-04-17 17:39 4.7KCOILS output, window length 21
[ ]jp_h4MDDaN.coilseq.lupas_282015-04-17 17:39 4.7KCOILS output, window length 28
[ ]jp_h4MDDaN.concise2015-04-17 17:39 212KPrediction: coiled-coil, solvent, alignment
[ ]jp_h4MDDaN.concise.blc2015-04-17 17:39 109KBLC format prediction and alignment data
[ ]jp_h4MDDaN.concise.fasta2015-04-17 17:39 110KPrediction: coiled-coil, solvent, alignment
[ ]jp_h4MDDaN.concise.pdf2015-04-17 17:40 712KPDF prediction and alignment data
[ ]jp_h4MDDaN.concise.ps2015-04-17 17:39 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_h4MDDaN.fasta2015-04-17 17:33 126 Input query sequence in FASTA format
[ ]jp_h4MDDaN.full_MSA.fasta2015-04-17 17:38 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_h4MDDaN.full_MSA.fasta.noGaps.html2015-04-17 17:40 706KFull MSA before JPred filters in FASTA
[TXT]jp_h4MDDaN.full_MSA.fasta.withGaps.html2015-04-17 17:40 4.3MFull MSA before JPred filters in FASTA
[ ]jp_h4MDDaN.hmm2015-04-17 17:39 21KHHMer2 profile of the alignment
[TXT]jp_h4MDDaN.html2015-04-17 17:39 283KHTML prediction and alignment data
[ ]jp_h4MDDaN.input2015-04-17 16:46 119 Raw input data for analysis
[ ]jp_h4MDDaN.jalview2015-04-17 17:39 3.1KJalview annotation file for alignment
[ ]jp_h4MDDaN.jnet2015-04-17 17:39 4.2KJnet secondary structure output
[TXT]jp_h4MDDaN.profile2015-04-17 17:37 18KPSIBLAST profile from alignment
[ ]jp_h4MDDaN.pssm2015-04-17 17:39 24KPSIBLAST PSSM for Jnet
[TXT]jp_h4MDDaN.results.html2016-02-15 12:19 55KJPred results page
[TXT]jp_h4MDDaN.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_h4MDDaN.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_h4MDDaN.seq2015-04-17 16:46 126 Sequence data file
[TXT]jp_h4MDDaN.simple.html2015-04-17 17:39 1.3KBrief HTML: sequence and prediction only
[TXT]jp_h4MDDaN.svg.html2015-04-17 17:40 47KJalview SVG summary of results
[ ]jp_h4MDDaN.tar.gz2015-04-17 17:40 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.