JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:36 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wn2a_.name2015-04-17 17:23 0 Job name flag file
[ ]jp_KUn69mh.align2015-04-17 18:36 105KPSIBLAST alignment in FASTA format
[TXT]jp_KUn69mh.als2015-04-17 18:36 2.4KAlscript command file for PS/PDF output
[ ]jp_KUn69mh.blast.gz2015-04-17 18:35 865KCompressed PSIBLAST output file
[TXT]jp_KUn69mh.coils.csv2015-04-17 18:36 738 COILS output in CSV format
[ ]jp_KUn69mh.coilseq.lupas_142015-04-17 18:36 5.0KCOILS output, window length 14
[ ]jp_KUn69mh.coilseq.lupas_212015-04-17 18:36 5.0KCOILS output, window length 21
[ ]jp_KUn69mh.coilseq.lupas_282015-04-17 18:36 5.0KCOILS output, window length 28
[ ]jp_KUn69mh.concise2015-04-17 18:36 205KPrediction: coiled-coil, solvent, alignment
[ ]jp_KUn69mh.concise.blc2015-04-17 18:36 105KBLC format prediction and alignment data
[ ]jp_KUn69mh.concise.fasta2015-04-17 18:36 106KPrediction: coiled-coil, solvent, alignment
[ ]jp_KUn69mh.concise.pdf2015-04-17 18:36 684KPDF prediction and alignment data
[ ]jp_KUn69mh.concise.ps2015-04-17 18:36 12MPrediction: coiled-coil, solvent, alignment
[ ]jp_KUn69mh.fasta2015-04-17 18:28 132 Input query sequence in FASTA format
[ ]jp_KUn69mh.full_MSA.fasta2015-04-17 18:35 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_KUn69mh.full_MSA.fasta.noGaps.html2015-04-17 18:36 332KFull MSA before JPred filters in FASTA
[TXT]jp_KUn69mh.full_MSA.fasta.withGaps.html2015-04-17 18:36 4.9MFull MSA before JPred filters in FASTA
[ ]jp_KUn69mh.hmm2015-04-17 18:36 22KHHMer2 profile of the alignment
[TXT]jp_KUn69mh.html2015-04-17 18:36 268KHTML prediction and alignment data
[ ]jp_KUn69mh.input2015-04-17 17:23 125 Raw input data for analysis
[ ]jp_KUn69mh.jalview2015-04-17 18:36 3.2KJalview annotation file for alignment
[ ]jp_KUn69mh.jnet2015-04-17 18:36 4.4KJnet secondary structure output
[TXT]jp_KUn69mh.profile2015-04-17 18:33 19KPSIBLAST profile from alignment
[ ]jp_KUn69mh.pssm2015-04-17 18:36 25KPSIBLAST PSSM for Jnet
[TXT]jp_KUn69mh.results.html2016-02-15 12:19 57KJPred results page
[TXT]jp_KUn69mh.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_KUn69mh.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_KUn69mh.seq2015-04-17 17:23 132 Sequence data file
[TXT]jp_KUn69mh.simple.html2015-04-17 18:36 1.3KBrief HTML: sequence and prediction only
[TXT]jp_KUn69mh.svg.html2015-04-17 18:36 49KJalview SVG summary of results
[ ]jp_KUn69mh.tar.gz2015-04-17 18:36 2.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.