JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:40 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wpba_.name2015-04-17 18:00 0 Job name flag file
[ ]jp_2y8pqc1.align2015-04-17 19:40 27KPSIBLAST alignment in FASTA format
[TXT]jp_2y8pqc1.als2015-04-17 19:40 2.2KAlscript command file for PS/PDF output
[ ]jp_2y8pqc1.blast.gz2015-04-17 19:40 94KCompressed PSIBLAST output file
[TXT]jp_2y8pqc1.coils.csv2015-04-17 19:40 1.0KCOILS output in CSV format
[ ]jp_2y8pqc1.coilseq.lupas_142015-04-17 19:40 7.1KCOILS output, window length 14
[ ]jp_2y8pqc1.coilseq.lupas_212015-04-17 19:40 7.1KCOILS output, window length 21
[ ]jp_2y8pqc1.coilseq.lupas_282015-04-17 19:40 7.1KCOILS output, window length 28
[ ]jp_2y8pqc1.concise2015-04-17 19:40 58KPrediction: coiled-coil, solvent, alignment
[ ]jp_2y8pqc1.concise.blc2015-04-17 19:40 29KBLC format prediction and alignment data
[ ]jp_2y8pqc1.concise.fasta2015-04-17 19:40 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_2y8pqc1.concise.pdf2015-04-17 19:40 192KPDF prediction and alignment data
[ ]jp_2y8pqc1.concise.ps2015-04-17 19:40 3.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_2y8pqc1.fasta2015-04-17 19:36 183 Input query sequence in FASTA format
[ ]jp_2y8pqc1.full_MSA.fasta2015-04-17 19:40 132KFull MSA before JPred filters in FASTA
[TXT]jp_2y8pqc1.full_MSA.fasta.noGaps.html2015-04-17 19:40 63KFull MSA before JPred filters in FASTA
[TXT]jp_2y8pqc1.full_MSA.fasta.withGaps.html2015-04-17 19:40 625KFull MSA before JPred filters in FASTA
[ ]jp_2y8pqc1.hmm2015-04-17 19:40 32KHHMer2 profile of the alignment
[TXT]jp_2y8pqc1.html2015-04-17 19:40 70KHTML prediction and alignment data
[ ]jp_2y8pqc1.input2015-04-17 18:00 175 Raw input data for analysis
[ ]jp_2y8pqc1.jalview2015-04-17 19:40 4.2KJalview annotation file for alignment
[ ]jp_2y8pqc1.jnet2015-04-17 19:40 6.2KJnet secondary structure output
[TXT]jp_2y8pqc1.profile2015-04-17 19:38 27KPSIBLAST profile from alignment
[ ]jp_2y8pqc1.pssm2015-04-17 19:40 36KPSIBLAST PSSM for Jnet
[TXT]jp_2y8pqc1.results.html2016-02-15 12:19 75KJPred results page
[TXT]jp_2y8pqc1.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_2y8pqc1.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_2y8pqc1.seq2015-04-17 18:00 183 Sequence data file
[TXT]jp_2y8pqc1.simple.html2015-04-17 19:40 1.4KBrief HTML: sequence and prediction only
[TXT]jp_2y8pqc1.svg.html2015-04-17 19:40 67KJalview SVG summary of results
[ ]jp_2y8pqc1.tar.gz2015-04-17 19:40 439KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.