JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:36 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wqga_.name2015-04-17 17:23 0 Job name flag file
[ ]jp_5DiFjzL.align2015-04-17 18:36 154KPSIBLAST alignment in FASTA format
[TXT]jp_5DiFjzL.als2015-04-17 18:36 2.5KAlscript command file for PS/PDF output
[ ]jp_5DiFjzL.blast.gz2015-04-17 18:35 1.6MCompressed PSIBLAST output file
[TXT]jp_5DiFjzL.coils.csv2015-04-17 18:36 1.1KCOILS output in CSV format
[ ]jp_5DiFjzL.coilseq.lupas_142015-04-17 18:36 7.7KCOILS output, window length 14
[ ]jp_5DiFjzL.coilseq.lupas_212015-04-17 18:36 7.7KCOILS output, window length 21
[ ]jp_5DiFjzL.coilseq.lupas_282015-04-17 18:36 7.7KCOILS output, window length 28
[ ]jp_5DiFjzL.concise2015-04-17 18:36 305KPrediction: coiled-coil, solvent, alignment
[ ]jp_5DiFjzL.concise.blc2015-04-17 18:36 155KBLC format prediction and alignment data
[ ]jp_5DiFjzL.concise.fasta2015-04-17 18:36 156KPrediction: coiled-coil, solvent, alignment
[ ]jp_5DiFjzL.concise.pdf2015-04-17 18:36 1.0MPDF prediction and alignment data
[ ]jp_5DiFjzL.concise.ps2015-04-17 18:36 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_5DiFjzL.fasta2015-04-17 18:29 199 Input query sequence in FASTA format
[ ]jp_5DiFjzL.full_MSA.fasta2015-04-17 18:35 2.3MFull MSA before JPred filters in FASTA
[TXT]jp_5DiFjzL.full_MSA.fasta.noGaps.html2015-04-17 18:36 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_5DiFjzL.full_MSA.fasta.withGaps.html2015-04-17 18:36 11MFull MSA before JPred filters in FASTA
[ ]jp_5DiFjzL.hmm2015-04-17 18:36 35KHHMer2 profile of the alignment
[TXT]jp_5DiFjzL.html2015-04-17 18:36 322KHTML prediction and alignment data
[ ]jp_5DiFjzL.input2015-04-17 17:23 191 Raw input data for analysis
[ ]jp_5DiFjzL.jalview2015-04-17 18:36 4.6KJalview annotation file for alignment
[ ]jp_5DiFjzL.jnet2015-04-17 18:36 6.8KJnet secondary structure output
[TXT]jp_5DiFjzL.profile2015-04-17 18:32 30KPSIBLAST profile from alignment
[ ]jp_5DiFjzL.pssm2015-04-17 18:36 40KPSIBLAST PSSM for Jnet
[TXT]jp_5DiFjzL.results.html2016-02-15 12:19 81KJPred results page
[TXT]jp_5DiFjzL.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_5DiFjzL.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_5DiFjzL.seq2015-04-17 17:23 199 Sequence data file
[TXT]jp_5DiFjzL.simple.html2015-04-17 18:36 1.4KBrief HTML: sequence and prediction only
[TXT]jp_5DiFjzL.svg.html2015-04-17 18:36 73KJalview SVG summary of results
[ ]jp_5DiFjzL.tar.gz2015-04-17 18:36 4.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.