JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:46 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wu9a1.name2015-04-17 15:33 0 Job name flag file
[ ]jp_fuVgx7j.align2015-04-17 15:45 20KPSIBLAST alignment in FASTA format
[TXT]jp_fuVgx7j.als2015-04-17 15:45 1.4KAlscript command file for PS/PDF output
[ ]jp_fuVgx7j.blast.gz2015-04-17 15:45 113KCompressed PSIBLAST output file
[TXT]jp_fuVgx7j.coils.csv2015-04-17 15:45 384 COILS output in CSV format
[ ]jp_fuVgx7j.coilseq.lupas_142015-04-17 15:45 2.5KCOILS output, window length 14
[ ]jp_fuVgx7j.coilseq.lupas_212015-04-17 15:45 2.5KCOILS output, window length 21
[ ]jp_fuVgx7j.coilseq.lupas_282015-04-17 15:45 2.5KCOILS output, window length 28
[ ]jp_fuVgx7j.concise2015-04-17 15:45 39KPrediction: coiled-coil, solvent, alignment
[ ]jp_fuVgx7j.concise.blc2015-04-17 15:45 20KBLC format prediction and alignment data
[ ]jp_fuVgx7j.concise.fasta2015-04-17 15:45 20KPrediction: coiled-coil, solvent, alignment
[ ]jp_fuVgx7j.concise.pdf2015-04-17 15:45 105KPDF prediction and alignment data
[ ]jp_fuVgx7j.concise.ps2015-04-17 15:45 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_fuVgx7j.fasta2015-04-17 15:40 72 Input query sequence in FASTA format
[ ]jp_fuVgx7j.full_MSA.fasta2015-04-17 15:45 177KFull MSA before JPred filters in FASTA
[TXT]jp_fuVgx7j.full_MSA.fasta.noGaps.html2015-04-17 15:45 110KFull MSA before JPred filters in FASTA
[TXT]jp_fuVgx7j.full_MSA.fasta.withGaps.html2015-04-17 15:45 624KFull MSA before JPred filters in FASTA
[ ]jp_fuVgx7j.hmm2015-04-17 15:45 11KHHMer2 profile of the alignment
[TXT]jp_fuVgx7j.html2015-04-17 15:45 79KHTML prediction and alignment data
[ ]jp_fuVgx7j.input2015-04-17 15:33 66 Raw input data for analysis
[ ]jp_fuVgx7j.jalview2015-04-17 15:45 2.0KJalview annotation file for alignment
[ ]jp_fuVgx7j.jnet2015-04-17 15:45 2.2KJnet secondary structure output
[TXT]jp_fuVgx7j.profile2015-04-17 15:44 9.8KPSIBLAST profile from alignment
[ ]jp_fuVgx7j.pssm2015-04-17 15:45 13KPSIBLAST PSSM for Jnet
[TXT]jp_fuVgx7j.results.html2016-02-15 12:19 33KJPred results page
[TXT]jp_fuVgx7j.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_fuVgx7j.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_fuVgx7j.seq2015-04-17 15:33 72 Sequence data file
[TXT]jp_fuVgx7j.simple.html2015-04-17 15:45 1.0KBrief HTML: sequence and prediction only
[TXT]jp_fuVgx7j.svg.html2015-04-17 15:46 25KJalview SVG summary of results
[ ]jp_fuVgx7j.tar.gz2015-04-17 15:46 303KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.