JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wuil_.name2015-04-17 18:01 0 Job name flag file
[ ]jp_Jm1ODNj.align2015-04-17 19:42 170KPSIBLAST alignment in FASTA format
[TXT]jp_Jm1ODNj.als2015-04-17 19:42 5.4KAlscript command file for PS/PDF output
[ ]jp_Jm1ODNj.blast.gz2015-04-17 19:41 8.7MCompressed PSIBLAST output file
[TXT]jp_Jm1ODNj.coils.csv2015-04-17 19:42 3.2KCOILS output in CSV format
[ ]jp_Jm1ODNj.coilseq.lupas_142015-04-17 19:42 22KCOILS output, window length 14
[ ]jp_Jm1ODNj.coilseq.lupas_212015-04-17 19:42 22KCOILS output, window length 21
[ ]jp_Jm1ODNj.coilseq.lupas_282015-04-17 19:42 22KCOILS output, window length 28
[ ]jp_Jm1ODNj.concise2015-04-17 19:42 355KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jm1ODNj.concise.blc2015-04-17 19:42 176KBLC format prediction and alignment data
[ ]jp_Jm1ODNj.concise.fasta2015-04-17 19:42 175KPrediction: coiled-coil, solvent, alignment
[ ]jp_Jm1ODNj.concise.pdf2015-04-17 19:42 1.2MPDF prediction and alignment data
[ ]jp_Jm1ODNj.concise.ps2015-04-17 19:42 22MPrediction: coiled-coil, solvent, alignment
[ ]jp_Jm1ODNj.fasta2015-04-17 19:36 554 Input query sequence in FASTA format
[ ]jp_Jm1ODNj.full_MSA.fasta2015-04-17 19:42 21MFull MSA before JPred filters in FASTA
[TXT]jp_Jm1ODNj.full_MSA.fasta.noGaps.html2015-04-17 19:43 3.4MFull MSA before JPred filters in FASTA
[TXT]jp_Jm1ODNj.full_MSA.fasta.withGaps.html2015-04-17 19:43 75MFull MSA before JPred filters in FASTA
[ ]jp_Jm1ODNj.hmm2015-04-17 19:42 100KHHMer2 profile of the alignment
[TXT]jp_Jm1ODNj.html2015-04-17 19:42 279KHTML prediction and alignment data
[ ]jp_Jm1ODNj.input2015-04-17 18:01 541 Raw input data for analysis
[ ]jp_Jm1ODNj.jalview2015-04-17 19:42 12KJalview annotation file for alignment
[ ]jp_Jm1ODNj.jnet2015-04-17 19:42 19KJnet secondary structure output
[TXT]jp_Jm1ODNj.profile2015-04-17 19:40 85KPSIBLAST profile from alignment
[ ]jp_Jm1ODNj.pssm2015-04-17 19:42 115KPSIBLAST PSSM for Jnet
[TXT]jp_Jm1ODNj.results.html2016-02-15 12:19 216KJPred results page
[TXT]jp_Jm1ODNj.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_Jm1ODNj.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_Jm1ODNj.seq2015-04-17 18:01 554 Sequence data file
[TXT]jp_Jm1ODNj.simple.html2015-04-17 19:42 2.6KBrief HTML: sequence and prediction only
[TXT]jp_Jm1ODNj.svg.html2015-04-17 19:43 208KJalview SVG summary of results
[ ]jp_Jm1ODNj.tar.gz2015-04-17 19:43 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.