JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:17 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wvfa1.name2015-04-17 17:05 0 Job name flag file
[ ]jp_TiqChZ2.align2015-04-17 18:16 242KPSIBLAST alignment in FASTA format
[TXT]jp_TiqChZ2.als2015-04-17 18:16 3.7KAlscript command file for PS/PDF output
[ ]jp_TiqChZ2.blast.gz2015-04-17 18:14 5.6MCompressed PSIBLAST output file
[TXT]jp_TiqChZ2.coils.csv2015-04-17 18:16 1.7KCOILS output in CSV format
[ ]jp_TiqChZ2.coilseq.lupas_142015-04-17 18:16 12KCOILS output, window length 14
[ ]jp_TiqChZ2.coilseq.lupas_212015-04-17 18:16 12KCOILS output, window length 21
[ ]jp_TiqChZ2.coilseq.lupas_282015-04-17 18:16 12KCOILS output, window length 28
[ ]jp_TiqChZ2.concise2015-04-17 18:16 481KPrediction: coiled-coil, solvent, alignment
[ ]jp_TiqChZ2.concise.blc2015-04-17 18:16 243KBLC format prediction and alignment data
[ ]jp_TiqChZ2.concise.fasta2015-04-17 18:16 245KPrediction: coiled-coil, solvent, alignment
[ ]jp_TiqChZ2.concise.pdf2015-04-17 18:16 1.6MPDF prediction and alignment data
[ ]jp_TiqChZ2.concise.ps2015-04-17 18:16 29MPrediction: coiled-coil, solvent, alignment
[ ]jp_TiqChZ2.fasta2015-04-17 18:05 295 Input query sequence in FASTA format
[ ]jp_TiqChZ2.full_MSA.fasta2015-04-17 18:15 23MFull MSA before JPred filters in FASTA
[TXT]jp_TiqChZ2.full_MSA.fasta.noGaps.html2015-04-17 18:17 3.2MFull MSA before JPred filters in FASTA
[TXT]jp_TiqChZ2.full_MSA.fasta.withGaps.html2015-04-17 18:17 73MFull MSA before JPred filters in FASTA
[ ]jp_TiqChZ2.hmm2015-04-17 18:16 52KHHMer2 profile of the alignment
[TXT]jp_TiqChZ2.html2015-04-17 18:16 427KHTML prediction and alignment data
[ ]jp_TiqChZ2.input2015-04-17 17:05 286 Raw input data for analysis
[ ]jp_TiqChZ2.jalview2015-04-17 18:16 6.5KJalview annotation file for alignment
[ ]jp_TiqChZ2.jnet2015-04-17 18:16 10KJnet secondary structure output
[TXT]jp_TiqChZ2.profile2015-04-17 18:11 45KPSIBLAST profile from alignment
[ ]jp_TiqChZ2.pssm2015-04-17 18:16 60KPSIBLAST PSSM for Jnet
[TXT]jp_TiqChZ2.results.html2016-02-15 12:19 119KJPred results page
[TXT]jp_TiqChZ2.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_TiqChZ2.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_TiqChZ2.seq2015-04-17 17:05 295 Sequence data file
[TXT]jp_TiqChZ2.simple.html2015-04-17 18:16 1.8KBrief HTML: sequence and prediction only
[TXT]jp_TiqChZ2.svg.html2015-04-17 18:17 111KJalview SVG summary of results
[ ]jp_TiqChZ2.tar.gz2015-04-17 18:17 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.