JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:36 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1wvqa_.name2015-04-17 17:23 0 Job name flag file
[ ]jp_P4fxHNf.align2015-04-17 18:36 26KPSIBLAST alignment in FASTA format
[TXT]jp_P4fxHNf.als2015-04-17 18:36 3.3KAlscript command file for PS/PDF output
[ ]jp_P4fxHNf.blast.gz2015-04-17 18:36 62KCompressed PSIBLAST output file
[TXT]jp_P4fxHNf.coils.csv2015-04-17 18:36 1.0KCOILS output in CSV format
[ ]jp_P4fxHNf.coilseq.lupas_142015-04-17 18:36 6.8KCOILS output, window length 14
[ ]jp_P4fxHNf.coilseq.lupas_212015-04-17 18:36 6.8KCOILS output, window length 21
[ ]jp_P4fxHNf.coilseq.lupas_282015-04-17 18:36 6.8KCOILS output, window length 28
[ ]jp_P4fxHNf.concise2015-04-17 18:36 57KPrediction: coiled-coil, solvent, alignment
[ ]jp_P4fxHNf.concise.blc2015-04-17 18:36 28KBLC format prediction and alignment data
[ ]jp_P4fxHNf.concise.fasta2015-04-17 18:36 28KPrediction: coiled-coil, solvent, alignment
[ ]jp_P4fxHNf.concise.pdf2015-04-17 18:36 189KPDF prediction and alignment data
[ ]jp_P4fxHNf.concise.ps2015-04-17 18:36 3.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_P4fxHNf.fasta2015-04-17 18:31 178 Input query sequence in FASTA format
[ ]jp_P4fxHNf.full_MSA.fasta2015-04-17 18:36 46KFull MSA before JPred filters in FASTA
[TXT]jp_P4fxHNf.full_MSA.fasta.noGaps.html2015-04-17 18:36 69KFull MSA before JPred filters in FASTA
[TXT]jp_P4fxHNf.full_MSA.fasta.withGaps.html2015-04-17 18:36 129KFull MSA before JPred filters in FASTA
[ ]jp_P4fxHNf.hmm2015-04-17 18:36 31KHHMer2 profile of the alignment
[TXT]jp_P4fxHNf.html2015-04-17 18:36 73KHTML prediction and alignment data
[ ]jp_P4fxHNf.input2015-04-17 17:23 170 Raw input data for analysis
[ ]jp_P4fxHNf.jalview2015-04-17 18:36 4.1KJalview annotation file for alignment
[ ]jp_P4fxHNf.jnet2015-04-17 18:36 6.0KJnet secondary structure output
[TXT]jp_P4fxHNf.profile2015-04-17 18:35 26KPSIBLAST profile from alignment
[ ]jp_P4fxHNf.pssm2015-04-17 18:36 35KPSIBLAST PSSM for Jnet
[TXT]jp_P4fxHNf.results.html2016-02-15 12:19 76KJPred results page
[TXT]jp_P4fxHNf.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_P4fxHNf.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_P4fxHNf.seq2015-04-17 17:23 178 Sequence data file
[TXT]jp_P4fxHNf.simple.html2015-04-17 18:36 1.5KBrief HTML: sequence and prediction only
[TXT]jp_P4fxHNf.svg.html2015-04-17 18:36 68KJalview SVG summary of results
[ ]jp_P4fxHNf.tar.gz2015-04-17 18:36 349KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.