JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:47 4.9KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x38a2.name2015-04-17 18:01 0 Job name flag file
[ ]jp_pz2bWSI.align2015-04-17 19:46 214KPSIBLAST alignment in FASTA format
[TXT]jp_pz2bWSI.als2015-04-17 19:46 3.0KAlscript command file for PS/PDF output
[ ]jp_pz2bWSI.blast.gz2015-04-17 19:44 16MCompressed PSIBLAST output file
[TXT]jp_pz2bWSI.coils.csv2015-04-17 19:46 1.3KCOILS output in CSV format
[ ]jp_pz2bWSI.coilseq.lupas_142015-04-17 19:46 9.0KCOILS output, window length 14
[ ]jp_pz2bWSI.coilseq.lupas_212015-04-17 19:46 9.0KCOILS output, window length 21
[ ]jp_pz2bWSI.coilseq.lupas_282015-04-17 19:46 9.0KCOILS output, window length 28
[ ]jp_pz2bWSI.concise2015-04-17 19:46 423KPrediction: coiled-coil, solvent, alignment
[ ]jp_pz2bWSI.concise.blc2015-04-17 19:46 215KBLC format prediction and alignment data
[ ]jp_pz2bWSI.concise.fasta2015-04-17 19:46 216KPrediction: coiled-coil, solvent, alignment
[ ]jp_pz2bWSI.concise.pdf2015-04-17 19:46 2.2KPDF prediction and alignment data
[ ]jp_pz2bWSI.concise.ps2015-04-17 19:46 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_pz2bWSI.fasta2015-04-17 19:36 229 Input query sequence in FASTA format
[ ]jp_pz2bWSI.full_MSA.fasta2015-04-17 19:45 35MFull MSA before JPred filters in FASTA
[TXT]jp_pz2bWSI.full_MSA.fasta.noGaps.html2015-04-17 19:47 2.5MFull MSA before JPred filters in FASTA
[TXT]jp_pz2bWSI.full_MSA.fasta.withGaps.html2015-04-17 19:47 72MFull MSA before JPred filters in FASTA
[ ]jp_pz2bWSI.hmm2015-04-17 19:46 40KHHMer2 profile of the alignment
[TXT]jp_pz2bWSI.html2015-04-17 19:46 409KHTML prediction and alignment data
[ ]jp_pz2bWSI.input2015-04-17 18:01 221 Raw input data for analysis
[ ]jp_pz2bWSI.jalview2015-04-17 19:46 5.0KJalview annotation file for alignment
[ ]jp_pz2bWSI.jnet2015-04-17 19:46 7.8KJnet secondary structure output
[TXT]jp_pz2bWSI.profile2015-04-17 19:43 34KPSIBLAST profile from alignment
[ ]jp_pz2bWSI.pssm2015-04-17 19:46 46KPSIBLAST PSSM for Jnet
[TXT]jp_pz2bWSI.results.html2016-02-15 12:19 93KJPred results page
[TXT]jp_pz2bWSI.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_pz2bWSI.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_pz2bWSI.seq2015-04-17 18:01 229 Sequence data file
[TXT]jp_pz2bWSI.simple.html2015-04-17 19:46 1.6KBrief HTML: sequence and prediction only
[TXT]jp_pz2bWSI.svg.html2015-04-17 19:47 85KJalview SVG summary of results
[ ]jp_pz2bWSI.tar.gz2015-04-17 19:47 24MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.