JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:52 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x3la_.name2015-04-17 15:33 0 Job name flag file
[ ]jp_eKgagsW.align2015-04-17 15:50 395KPSIBLAST alignment in FASTA format
[TXT]jp_eKgagsW.als2015-04-17 15:50 5.8KAlscript command file for PS/PDF output
[ ]jp_eKgagsW.blast.gz2015-04-17 15:49 2.7MCompressed PSIBLAST output file
[TXT]jp_eKgagsW.coils.csv2015-04-17 15:50 2.6KCOILS output in CSV format
[ ]jp_eKgagsW.coilseq.lupas_142015-04-17 15:50 18KCOILS output, window length 14
[ ]jp_eKgagsW.coilseq.lupas_212015-04-17 15:50 18KCOILS output, window length 21
[ ]jp_eKgagsW.coilseq.lupas_282015-04-17 15:50 18KCOILS output, window length 28
[ ]jp_eKgagsW.concise2015-04-17 15:50 788KPrediction: coiled-coil, solvent, alignment
[ ]jp_eKgagsW.concise.blc2015-04-17 15:50 395KBLC format prediction and alignment data
[ ]jp_eKgagsW.concise.fasta2015-04-17 15:50 399KPrediction: coiled-coil, solvent, alignment
[ ]jp_eKgagsW.concise.pdf2015-04-17 15:51 2.8MPDF prediction and alignment data
[ ]jp_eKgagsW.concise.ps2015-04-17 15:50 50MPrediction: coiled-coil, solvent, alignment
[ ]jp_eKgagsW.fasta2015-04-17 15:40 455 Input query sequence in FASTA format
[ ]jp_eKgagsW.full_MSA.fasta2015-04-17 15:50 4.1MFull MSA before JPred filters in FASTA
[TXT]jp_eKgagsW.full_MSA.fasta.noGaps.html2015-04-17 15:52 730KFull MSA before JPred filters in FASTA
[TXT]jp_eKgagsW.full_MSA.fasta.withGaps.html2015-04-17 15:52 13MFull MSA before JPred filters in FASTA
[ ]jp_eKgagsW.hmm2015-04-17 15:50 82KHHMer2 profile of the alignment
[TXT]jp_eKgagsW.html2015-04-17 15:50 604KHTML prediction and alignment data
[ ]jp_eKgagsW.input2015-04-17 15:33 443 Raw input data for analysis
[ ]jp_eKgagsW.jalview2015-04-17 15:50 9.6KJalview annotation file for alignment
[ ]jp_eKgagsW.jnet2015-04-17 15:50 16KJnet secondary structure output
[TXT]jp_eKgagsW.profile2015-04-17 15:47 69KPSIBLAST profile from alignment
[ ]jp_eKgagsW.pssm2015-04-17 15:50 94KPSIBLAST PSSM for Jnet
[TXT]jp_eKgagsW.results.html2016-02-15 12:19 182KJPred results page
[TXT]jp_eKgagsW.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_eKgagsW.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_eKgagsW.seq2015-04-17 15:33 455 Sequence data file
[TXT]jp_eKgagsW.simple.html2015-04-17 15:50 2.5KBrief HTML: sequence and prediction only
[TXT]jp_eKgagsW.svg.html2015-04-17 15:52 174KJalview SVG summary of results
[ ]jp_eKgagsW.tar.gz2015-04-17 15:52 7.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.