JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:38 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x8qa_.name2015-04-17 16:46 0 Job name flag file
[ ]jp_IDq5mro.align2015-04-17 17:37 81KPSIBLAST alignment in FASTA format
[TXT]jp_IDq5mro.als2015-04-17 17:37 2.9KAlscript command file for PS/PDF output
[ ]jp_IDq5mro.blast.gz2015-04-17 17:37 168KCompressed PSIBLAST output file
[TXT]jp_IDq5mro.coils.csv2015-04-17 17:37 1.1KCOILS output in CSV format
[ ]jp_IDq5mro.coilseq.lupas_142015-04-17 17:37 7.7KCOILS output, window length 14
[ ]jp_IDq5mro.coilseq.lupas_212015-04-17 17:37 7.7KCOILS output, window length 21
[ ]jp_IDq5mro.coilseq.lupas_282015-04-17 17:37 7.7KCOILS output, window length 28
[ ]jp_IDq5mro.concise2015-04-17 17:37 163KPrediction: coiled-coil, solvent, alignment
[ ]jp_IDq5mro.concise.blc2015-04-17 17:37 82KBLC format prediction and alignment data
[ ]jp_IDq5mro.concise.fasta2015-04-17 17:37 83KPrediction: coiled-coil, solvent, alignment
[ ]jp_IDq5mro.concise.pdf2015-04-17 17:37 507KPDF prediction and alignment data
[ ]jp_IDq5mro.concise.ps2015-04-17 17:37 9.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_IDq5mro.fasta2015-04-17 17:34 199 Input query sequence in FASTA format
[ ]jp_IDq5mro.full_MSA.fasta2015-04-17 17:37 428KFull MSA before JPred filters in FASTA
[TXT]jp_IDq5mro.full_MSA.fasta.noGaps.html2015-04-17 17:37 169KFull MSA before JPred filters in FASTA
[TXT]jp_IDq5mro.full_MSA.fasta.withGaps.html2015-04-17 17:37 2.2MFull MSA before JPred filters in FASTA
[ ]jp_IDq5mro.hmm2015-04-17 17:37 35KHHMer2 profile of the alignment
[TXT]jp_IDq5mro.html2015-04-17 17:37 173KHTML prediction and alignment data
[ ]jp_IDq5mro.input2015-04-17 16:46 191 Raw input data for analysis
[ ]jp_IDq5mro.jalview2015-04-17 17:37 4.4KJalview annotation file for alignment
[ ]jp_IDq5mro.jnet2015-04-17 17:37 6.8KJnet secondary structure output
[TXT]jp_IDq5mro.profile2015-04-17 17:36 30KPSIBLAST profile from alignment
[ ]jp_IDq5mro.pssm2015-04-17 17:37 40KPSIBLAST PSSM for Jnet
[TXT]jp_IDq5mro.results.html2016-02-15 12:19 81KJPred results page
[TXT]jp_IDq5mro.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_IDq5mro.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_IDq5mro.seq2015-04-17 16:46 199 Sequence data file
[TXT]jp_IDq5mro.simple.html2015-04-17 17:37 1.5KBrief HTML: sequence and prediction only
[TXT]jp_IDq5mro.svg.html2015-04-17 17:38 73KJalview SVG summary of results
[ ]jp_IDq5mro.tar.gz2015-04-17 17:38 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.