JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:52 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1x9da_.name2015-04-17 19:15 0 Job name flag file
[ ]jp_BussubS.align2015-04-17 21:51 336KPSIBLAST alignment in FASTA format
[TXT]jp_BussubS.als2015-04-17 21:51 4.6KAlscript command file for PS/PDF output
[ ]jp_BussubS.blast.gz2015-04-17 21:49 11MCompressed PSIBLAST output file
[TXT]jp_BussubS.coils.csv2015-04-17 21:51 2.7KCOILS output in CSV format
[ ]jp_BussubS.coilseq.lupas_142015-04-17 21:51 19KCOILS output, window length 14
[ ]jp_BussubS.coilseq.lupas_212015-04-17 21:51 19KCOILS output, window length 21
[ ]jp_BussubS.coilseq.lupas_282015-04-17 21:51 19KCOILS output, window length 28
[ ]jp_BussubS.concise2015-04-17 21:51 676KPrediction: coiled-coil, solvent, alignment
[ ]jp_BussubS.concise.blc2015-04-17 21:51 338KBLC format prediction and alignment data
[ ]jp_BussubS.concise.fasta2015-04-17 21:51 341KPrediction: coiled-coil, solvent, alignment
[ ]jp_BussubS.concise.pdf2015-04-17 21:51 2.3MPDF prediction and alignment data
[ ]jp_BussubS.concise.ps2015-04-17 21:51 43MPrediction: coiled-coil, solvent, alignment
[ ]jp_BussubS.fasta2015-04-17 21:41 470 Input query sequence in FASTA format
[ ]jp_BussubS.full_MSA.fasta2015-04-17 21:50 20MFull MSA before JPred filters in FASTA
[TXT]jp_BussubS.full_MSA.fasta.noGaps.html2015-04-17 21:52 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_BussubS.full_MSA.fasta.withGaps.html2015-04-17 21:52 46MFull MSA before JPred filters in FASTA
[ ]jp_BussubS.hmm2015-04-17 21:51 85KHHMer2 profile of the alignment
[TXT]jp_BussubS.html2015-04-17 21:51 513KHTML prediction and alignment data
[ ]jp_BussubS.input2015-04-17 19:15 458 Raw input data for analysis
[ ]jp_BussubS.jalview2015-04-17 21:51 9.8KJalview annotation file for alignment
[ ]jp_BussubS.jnet2015-04-17 21:51 16KJnet secondary structure output
[TXT]jp_BussubS.profile2015-04-17 21:47 72KPSIBLAST profile from alignment
[ ]jp_BussubS.pssm2015-04-17 21:51 97KPSIBLAST PSSM for Jnet
[TXT]jp_BussubS.results.html2016-02-15 12:19 185KJPred results page
[TXT]jp_BussubS.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_BussubS.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_BussubS.seq2015-04-17 19:15 470 Sequence data file
[TXT]jp_BussubS.simple.html2015-04-17 21:51 2.4KBrief HTML: sequence and prediction only
[TXT]jp_BussubS.svg.html2015-04-17 21:52 177KJalview SVG summary of results
[ ]jp_BussubS.tar.gz2015-04-17 21:52 19MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.