JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:59 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1y12a1.name2015-04-17 17:09 0 Job name flag file
[ ]jp_8WdYe0p.align2015-04-17 19:59 144KPSIBLAST alignment in FASTA format
[TXT]jp_8WdYe0p.als2015-04-17 19:59 2.9KAlscript command file for PS/PDF output
[ ]jp_8WdYe0p.blast.gz2015-04-17 19:58 557KCompressed PSIBLAST output file
[TXT]jp_8WdYe0p.coils.csv2015-04-17 19:59 1.0KCOILS output in CSV format
[ ]jp_8WdYe0p.coilseq.lupas_142015-04-17 19:59 6.7KCOILS output, window length 14
[ ]jp_8WdYe0p.coilseq.lupas_212015-04-17 19:59 6.7KCOILS output, window length 21
[ ]jp_8WdYe0p.coilseq.lupas_282015-04-17 19:59 6.7KCOILS output, window length 28
[ ]jp_8WdYe0p.concise2015-04-17 19:59 281KPrediction: coiled-coil, solvent, alignment
[ ]jp_8WdYe0p.concise.blc2015-04-17 19:59 144KBLC format prediction and alignment data
[ ]jp_8WdYe0p.concise.fasta2015-04-17 19:59 145KPrediction: coiled-coil, solvent, alignment
[ ]jp_8WdYe0p.concise.pdf2015-04-17 19:59 939KPDF prediction and alignment data
[ ]jp_8WdYe0p.concise.ps2015-04-17 19:59 17MPrediction: coiled-coil, solvent, alignment
[ ]jp_8WdYe0p.fasta2015-04-17 18:12 175 Input query sequence in FASTA format
[ ]jp_8WdYe0p.full_MSA.fasta2015-04-17 19:58 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_8WdYe0p.full_MSA.fasta.noGaps.html2015-04-17 19:59 368KFull MSA before JPred filters in FASTA
[TXT]jp_8WdYe0p.full_MSA.fasta.withGaps.html2015-04-17 19:59 4.5MFull MSA before JPred filters in FASTA
[ ]jp_8WdYe0p.hmm2015-04-17 19:59 30KHHMer2 profile of the alignment
[TXT]jp_8WdYe0p.html2015-04-17 19:59 313KHTML prediction and alignment data
[ ]jp_8WdYe0p.input2015-04-17 17:09 167 Raw input data for analysis
[ ]jp_8WdYe0p.jalview2015-04-17 19:59 4.0KJalview annotation file for alignment
[ ]jp_8WdYe0p.jnet2015-04-17 19:59 5.9KJnet secondary structure output
[TXT]jp_8WdYe0p.profile2015-04-17 19:51 26KPSIBLAST profile from alignment
[ ]jp_8WdYe0p.pssm2015-04-17 19:59 34KPSIBLAST PSSM for Jnet
[TXT]jp_8WdYe0p.results.html2016-02-15 12:19 72KJPred results page
[TXT]jp_8WdYe0p.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_8WdYe0p.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_8WdYe0p.seq2015-04-17 17:09 175 Sequence data file
[TXT]jp_8WdYe0p.simple.html2015-04-17 19:59 1.5KBrief HTML: sequence and prediction only
[TXT]jp_8WdYe0p.svg.html2015-04-17 19:59 64KJalview SVG summary of results
[ ]jp_8WdYe0p.tar.gz2015-04-17 19:59 2.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.