JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:41 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1y9ia_.name2015-04-17 18:01 0 Job name flag file
[ ]jp_JrKMeFb.align2015-04-17 19:40 50KPSIBLAST alignment in FASTA format
[TXT]jp_JrKMeFb.als2015-04-17 19:40 2.9KAlscript command file for PS/PDF output
[ ]jp_JrKMeFb.blast.gz2015-04-17 19:40 170KCompressed PSIBLAST output file
[TXT]jp_JrKMeFb.coils.csv2015-04-17 19:40 1.0KCOILS output in CSV format
[ ]jp_JrKMeFb.coilseq.lupas_142015-04-17 19:40 6.7KCOILS output, window length 14
[ ]jp_JrKMeFb.coilseq.lupas_212015-04-17 19:40 6.7KCOILS output, window length 21
[ ]jp_JrKMeFb.coilseq.lupas_282015-04-17 19:40 6.7KCOILS output, window length 28
[ ]jp_JrKMeFb.concise2015-04-17 19:40 103KPrediction: coiled-coil, solvent, alignment
[ ]jp_JrKMeFb.concise.blc2015-04-17 19:40 52KBLC format prediction and alignment data
[ ]jp_JrKMeFb.concise.fasta2015-04-17 19:40 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_JrKMeFb.concise.pdf2015-04-17 19:40 352KPDF prediction and alignment data
[ ]jp_JrKMeFb.concise.ps2015-04-17 19:40 6.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_JrKMeFb.fasta2015-04-17 19:38 174 Input query sequence in FASTA format
[ ]jp_JrKMeFb.full_MSA.fasta2015-04-17 19:40 188KFull MSA before JPred filters in FASTA
[TXT]jp_JrKMeFb.full_MSA.fasta.noGaps.html2015-04-17 19:40 143KFull MSA before JPred filters in FASTA
[TXT]jp_JrKMeFb.full_MSA.fasta.withGaps.html2015-04-17 19:40 1.0MFull MSA before JPred filters in FASTA
[ ]jp_JrKMeFb.hmm2015-04-17 19:40 30KHHMer2 profile of the alignment
[TXT]jp_JrKMeFb.html2015-04-17 19:40 124KHTML prediction and alignment data
[ ]jp_JrKMeFb.input2015-04-17 18:01 166 Raw input data for analysis
[ ]jp_JrKMeFb.jalview2015-04-17 19:40 4.1KJalview annotation file for alignment
[ ]jp_JrKMeFb.jnet2015-04-17 19:40 5.9KJnet secondary structure output
[TXT]jp_JrKMeFb.profile2015-04-17 19:39 26KPSIBLAST profile from alignment
[ ]jp_JrKMeFb.pssm2015-04-17 19:40 34KPSIBLAST PSSM for Jnet
[TXT]jp_JrKMeFb.results.html2016-02-15 12:19 74KJPred results page
[TXT]jp_JrKMeFb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_JrKMeFb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_JrKMeFb.seq2015-04-17 18:01 174 Sequence data file
[TXT]jp_JrKMeFb.simple.html2015-04-17 19:40 1.5KBrief HTML: sequence and prediction only
[TXT]jp_JrKMeFb.svg.html2015-04-17 19:41 66KJalview SVG summary of results
[ ]jp_JrKMeFb.tar.gz2015-04-17 19:41 693KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.