JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]d1yk4a_.name2015-04-17 18:02 0 Job name flag file
[ ]jp_7c7VWtk.input2015-04-17 18:02 59 Raw input data for analysis
[ ]jp_7c7VWtk.fasta2015-04-17 19:38 65 Input query sequence in FASTA format
[ ]jp_7c7VWtk.seq2015-04-17 18:02 65 Sequence data file
[TXT]jp_7c7VWtk.coils.csv2015-04-17 19:41 342 COILS output in CSV format
[TXT]jp_7c7VWtk.simple.html2015-04-17 19:41 1.0KBrief HTML: sequence and prediction only
[TXT]jp_7c7VWtk.als2015-04-17 19:41 1.5KAlscript command file for PS/PDF output
[ ]jp_7c7VWtk.jalview2015-04-17 19:41 1.8KJalview annotation file for alignment
[ ]jp_7c7VWtk.jnet2015-04-17 19:41 2.0KJnet secondary structure output
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[ ]jp_7c7VWtk.coilseq.lupas_142015-04-17 19:41 2.2KCOILS output, window length 14
[ ]jp_7c7VWtk.coilseq.lupas_212015-04-17 19:41 2.2KCOILS output, window length 21
[ ]jp_7c7VWtk.coilseq.lupas_282015-04-17 19:41 2.2KCOILS output, window length 28
[TXT]LOG2015-04-17 19:42 4.7KJPred server log file
[TXT]jp_7c7VWtk.profile2015-04-17 19:40 8.7KPSIBLAST profile from alignment
[ ]jp_7c7VWtk.hmm2015-04-17 19:41 9.8KHHMer2 profile of the alignment
[ ]jp_7c7VWtk.pssm2015-04-17 19:41 11KPSIBLAST PSSM for Jnet
[TXT]jp_7c7VWtk.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7c7VWtk.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[TXT]jp_7c7VWtk.svg.html2015-04-17 19:42 22KJalview SVG summary of results
[TXT]jp_7c7VWtk.results.html2016-02-15 12:19 30KJPred results page
[ ]jp_7c7VWtk.align2015-04-17 19:41 56KPSIBLAST alignment in FASTA format
[ ]jp_7c7VWtk.concise.blc2015-04-17 19:41 56KBLC format prediction and alignment data
[ ]jp_7c7VWtk.concise.fasta2015-04-17 19:41 56KPrediction: coiled-coil, solvent, alignment
[ ]jp_7c7VWtk.concise2015-04-17 19:41 105KPrediction: coiled-coil, solvent, alignment
[TXT]jp_7c7VWtk.html2015-04-17 19:41 215KHTML prediction and alignment data
[ ]jp_7c7VWtk.concise.pdf2015-04-17 19:41 299KPDF prediction and alignment data
[TXT]jp_7c7VWtk.full_MSA.fasta.noGaps.html2015-04-17 19:41 508KFull MSA before JPred filters in FASTA
[ ]jp_7c7VWtk.blast.gz2015-04-17 19:41 512KCompressed PSIBLAST output file
[ ]jp_7c7VWtk.full_MSA.fasta2015-04-17 19:41 554KFull MSA before JPred filters in FASTA
[ ]jp_7c7VWtk.tar.gz2015-04-17 19:42 1.1MArchive containing complete results
[TXT]jp_7c7VWtk.full_MSA.fasta.withGaps.html2015-04-17 19:41 2.8MFull MSA before JPred filters in FASTA
[ ]jp_7c7VWtk.concise.ps2015-04-17 19:41 5.4MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.