A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 17:38 | 4.7K | JPred server log file |
| README | 2016-02-15 12:19 | 2.1K | Results file descriptions |
| d1yoza1.name | 2015-04-17 16:47 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_hhpERnq.align | 2015-04-17 17:38 | 510 | PSIBLAST alignment in FASTA format |
| jp_hhpERnq.als | 2015-04-17 17:38 | 1.8K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_hhpERnq.blast.gz | 2015-04-17 17:38 | 2.2K | Compressed PSIBLAST output file |
| jp_hhpERnq.coils.csv | 2015-04-17 17:38 | 696 | COILS output in CSV format |
| jp_hhpERnq.coilseq.lupas_14 | 2015-04-17 17:38 | 4.7K | COILS output, window length 14 |
| jp_hhpERnq.coilseq.lupas_21 | 2015-04-17 17:38 | 4.7K | COILS output, window length 21 |
| jp_hhpERnq.coilseq.lupas_28 | 2015-04-17 17:38 | 4.7K | COILS output, window length 28 |
| jp_hhpERnq.concise | 2015-04-17 17:38 | 5.8K | Prediction: coiled-coil, solvent, alignment |
| jp_hhpERnq.concise.blc | 2015-04-17 17:38 | 2.2K | BLC format prediction and alignment data |
| jp_hhpERnq.concise.fasta | 2015-04-17 17:38 | 1.7K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_hhpERnq.concise.pdf | 2015-04-17 17:38 | 17K | PDF prediction and alignment data |
| jp_hhpERnq.concise.ps | 2015-04-17 17:38 | 267K | Prediction: coiled-coil, solvent, alignment |
| jp_hhpERnq.fasta | 2015-04-17 17:36 | 125 | Input query sequence in FASTA format |
| jp_hhpERnq.full_MSA.fasta | 2015-04-17 17:38 | 755 | Full MSA before JPred filters in FASTA |
| jp_hhpERnq.full_MSA.fasta.noGaps.html | 2015-04-17 17:38 | 1.2K | Full MSA before JPred filters in FASTA |
| jp_hhpERnq.full_MSA.fasta.withGaps.html | 2015-04-17 17:38 | 1.9K | Full MSA before JPred filters in FASTA |
| jp_hhpERnq.hmm | 2015-04-17 17:38 | 21K | HHMer2 profile of the alignment |
| jp_hhpERnq.html | 2015-04-17 17:38 | 15K | HTML prediction and alignment data |
| jp_hhpERnq.input | 2015-04-17 16:47 | 118 | Raw input data for analysis |
| jp_hhpERnq.jalview | 2015-04-17 17:38 | 3.1K | Jalview annotation file for alignment |
| jp_hhpERnq.jnet | 2015-04-17 17:38 | 4.1K | Jnet secondary structure output |
| jp_hhpERnq.profile | 2015-04-17 17:37 | 18K | PSIBLAST profile from alignment |
| jp_hhpERnq.pssm | 2015-04-17 17:38 | 24K | PSIBLAST PSSM for Jnet |
| jp_hhpERnq.results.html | 2016-02-15 12:19 | 53K | JPred results page |
| jp_hhpERnq.results_jalview.html | 2016-02-24 17:18 | 13K | Jalview results options |
| jp_hhpERnq.results_jalview_app.html | 2016-02-24 17:18 | 16K | HTML prediction and alignment data |
| jp_hhpERnq.seq | 2015-04-17 16:47 | 125 | Sequence data file |
| jp_hhpERnq.simple.html | 2015-04-17 17:38 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_hhpERnq.svg.html) | jp_hhpERnq.svg.html | 2015-04-17 17:38 | 45K | Jalview SVG summary of results |
| jp_hhpERnq.tar.gz | 2015-04-17 17:38 | 46K | Archive containing complete results |
