JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:40 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1yt3a1.name2015-04-17 16:47 0 Job name flag file
[ ]jp_hx7tXUb.align2015-04-17 17:39 104KPSIBLAST alignment in FASTA format
[TXT]jp_hx7tXUb.als2015-04-17 17:39 2.1KAlscript command file for PS/PDF output
[ ]jp_hx7tXUb.blast.gz2015-04-17 17:39 1.5MCompressed PSIBLAST output file
[TXT]jp_hx7tXUb.coils.csv2015-04-17 17:39 636 COILS output in CSV format
[ ]jp_hx7tXUb.coilseq.lupas_142015-04-17 17:39 4.2KCOILS output, window length 14
[ ]jp_hx7tXUb.coilseq.lupas_212015-04-17 17:39 4.2KCOILS output, window length 21
[ ]jp_hx7tXUb.coilseq.lupas_282015-04-17 17:39 4.2KCOILS output, window length 28
[ ]jp_hx7tXUb.concise2015-04-17 17:39 200KPrediction: coiled-coil, solvent, alignment
[ ]jp_hx7tXUb.concise.blc2015-04-17 17:39 104KBLC format prediction and alignment data
[ ]jp_hx7tXUb.concise.fasta2015-04-17 17:39 105KPrediction: coiled-coil, solvent, alignment
[ ]jp_hx7tXUb.concise.pdf2015-04-17 17:40 629KPDF prediction and alignment data
[ ]jp_hx7tXUb.concise.ps2015-04-17 17:39 11MPrediction: coiled-coil, solvent, alignment
[ ]jp_hx7tXUb.fasta2015-04-17 17:36 115 Input query sequence in FASTA format
[ ]jp_hx7tXUb.full_MSA.fasta2015-04-17 17:39 3.7MFull MSA before JPred filters in FASTA
[TXT]jp_hx7tXUb.full_MSA.fasta.noGaps.html2015-04-17 17:40 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_hx7tXUb.full_MSA.fasta.withGaps.html2015-04-17 17:40 15MFull MSA before JPred filters in FASTA
[ ]jp_hx7tXUb.hmm2015-04-17 17:39 19KHHMer2 profile of the alignment
[TXT]jp_hx7tXUb.html2015-04-17 17:39 282KHTML prediction and alignment data
[ ]jp_hx7tXUb.input2015-04-17 16:47 108 Raw input data for analysis
[ ]jp_hx7tXUb.jalview2015-04-17 17:39 2.9KJalview annotation file for alignment
[ ]jp_hx7tXUb.jnet2015-04-17 17:39 3.8KJnet secondary structure output
[TXT]jp_hx7tXUb.profile2015-04-17 17:38 16KPSIBLAST profile from alignment
[ ]jp_hx7tXUb.pssm2015-04-17 17:39 22KPSIBLAST PSSM for Jnet
[TXT]jp_hx7tXUb.results.html2016-02-15 12:19 50KJPred results page
[TXT]jp_hx7tXUb.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_hx7tXUb.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_hx7tXUb.seq2015-04-17 16:47 115 Sequence data file
[TXT]jp_hx7tXUb.simple.html2015-04-17 17:39 1.2KBrief HTML: sequence and prediction only
[TXT]jp_hx7tXUb.svg.html2015-04-17 17:40 42KJalview SVG summary of results
[ ]jp_hx7tXUb.tar.gz2015-04-17 17:40 3.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.