JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:42 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1yvra1.name2015-04-17 16:48 0 Job name flag file
[ ]jp_yepumyx.align2015-04-17 17:42 149KPSIBLAST alignment in FASTA format
[TXT]jp_yepumyx.als2015-04-17 17:42 4.4KAlscript command file for PS/PDF output
[ ]jp_yepumyx.blast.gz2015-04-17 17:42 750KCompressed PSIBLAST output file
[TXT]jp_yepumyx.coils.csv2015-04-17 17:42 2.1KCOILS output in CSV format
[ ]jp_yepumyx.coilseq.lupas_142015-04-17 17:42 15KCOILS output, window length 14
[ ]jp_yepumyx.coilseq.lupas_212015-04-17 17:42 15KCOILS output, window length 21
[ ]jp_yepumyx.coilseq.lupas_282015-04-17 17:42 15KCOILS output, window length 28
[ ]jp_yepumyx.concise2015-04-17 17:42 304KPrediction: coiled-coil, solvent, alignment
[ ]jp_yepumyx.concise.blc2015-04-17 17:42 152KBLC format prediction and alignment data
[ ]jp_yepumyx.concise.fasta2015-04-17 17:42 152KPrediction: coiled-coil, solvent, alignment
[ ]jp_yepumyx.concise.pdf2015-04-17 17:42 1.0MPDF prediction and alignment data
[ ]jp_yepumyx.concise.ps2015-04-17 17:42 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_yepumyx.fasta2015-04-17 17:38 363 Input query sequence in FASTA format
[ ]jp_yepumyx.full_MSA.fasta2015-04-17 17:42 1.9MFull MSA before JPred filters in FASTA
[TXT]jp_yepumyx.full_MSA.fasta.noGaps.html2015-04-17 17:42 288KFull MSA before JPred filters in FASTA
[TXT]jp_yepumyx.full_MSA.fasta.withGaps.html2015-04-17 17:42 5.8MFull MSA before JPred filters in FASTA
[ ]jp_yepumyx.hmm2015-04-17 17:42 65KHHMer2 profile of the alignment
[TXT]jp_yepumyx.html2015-04-17 17:42 262KHTML prediction and alignment data
[ ]jp_yepumyx.input2015-04-17 16:48 353 Raw input data for analysis
[ ]jp_yepumyx.jalview2015-04-17 17:42 7.8KJalview annotation file for alignment
[ ]jp_yepumyx.jnet2015-04-17 17:42 13KJnet secondary structure output
[TXT]jp_yepumyx.profile2015-04-17 17:41 55KPSIBLAST profile from alignment
[ ]jp_yepumyx.pssm2015-04-17 17:42 74KPSIBLAST PSSM for Jnet
[TXT]jp_yepumyx.results.html2016-02-15 12:19 148KJPred results page
[TXT]jp_yepumyx.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_yepumyx.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_yepumyx.seq2015-04-17 16:48 363 Sequence data file
[TXT]jp_yepumyx.simple.html2015-04-17 17:42 2.1KBrief HTML: sequence and prediction only
[TXT]jp_yepumyx.svg.html2015-04-17 17:42 140KJalview SVG summary of results
[ ]jp_yepumyx.tar.gz2015-04-17 17:42 2.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.