JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:45 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zbpa1.name2015-04-17 16:48 0 Job name flag file
[ ]jp_pyZYvrK.align2015-04-17 17:45 108KPSIBLAST alignment in FASTA format
[TXT]jp_pyZYvrK.als2015-04-17 17:45 4.2KAlscript command file for PS/PDF output
[ ]jp_pyZYvrK.blast.gz2015-04-17 17:44 1.1MCompressed PSIBLAST output file
[TXT]jp_pyZYvrK.coils.csv2015-04-17 17:45 1.6KCOILS output in CSV format
[ ]jp_pyZYvrK.coilseq.lupas_142015-04-17 17:45 11KCOILS output, window length 14
[ ]jp_pyZYvrK.coilseq.lupas_212015-04-17 17:45 11KCOILS output, window length 21
[ ]jp_pyZYvrK.coilseq.lupas_282015-04-17 17:45 11KCOILS output, window length 28
[ ]jp_pyZYvrK.concise2015-04-17 17:45 220KPrediction: coiled-coil, solvent, alignment
[ ]jp_pyZYvrK.concise.blc2015-04-17 17:45 110KBLC format prediction and alignment data
[ ]jp_pyZYvrK.concise.fasta2015-04-17 17:45 111KPrediction: coiled-coil, solvent, alignment
[ ]jp_pyZYvrK.concise.pdf2015-04-17 17:45 662KPDF prediction and alignment data
[ ]jp_pyZYvrK.concise.ps2015-04-17 17:45 13MPrediction: coiled-coil, solvent, alignment
[ ]jp_pyZYvrK.fasta2015-04-17 17:39 280 Input query sequence in FASTA format
[ ]jp_pyZYvrK.full_MSA.fasta2015-04-17 17:45 4.3MFull MSA before JPred filters in FASTA
[TXT]jp_pyZYvrK.full_MSA.fasta.noGaps.html2015-04-17 17:45 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_pyZYvrK.full_MSA.fasta.withGaps.html2015-04-17 17:45 16MFull MSA before JPred filters in FASTA
[ ]jp_pyZYvrK.hmm2015-04-17 17:45 50KHHMer2 profile of the alignment
[TXT]jp_pyZYvrK.html2015-04-17 17:45 210KHTML prediction and alignment data
[ ]jp_pyZYvrK.input2015-04-17 16:48 271 Raw input data for analysis
[ ]jp_pyZYvrK.jalview2015-04-17 17:45 6.2KJalview annotation file for alignment
[ ]jp_pyZYvrK.jnet2015-04-17 17:45 9.7KJnet secondary structure output
[TXT]jp_pyZYvrK.profile2015-04-17 17:42 42KPSIBLAST profile from alignment
[ ]jp_pyZYvrK.pssm2015-04-17 17:45 57KPSIBLAST PSSM for Jnet
[TXT]jp_pyZYvrK.results.html2016-02-15 12:19 116KJPred results page
[TXT]jp_pyZYvrK.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_pyZYvrK.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_pyZYvrK.seq2015-04-17 16:48 280 Sequence data file
[TXT]jp_pyZYvrK.simple.html2015-04-17 17:45 1.9KBrief HTML: sequence and prediction only
[TXT]jp_pyZYvrK.svg.html2015-04-17 17:45 108KJalview SVG summary of results
[ ]jp_pyZYvrK.tar.gz2015-04-17 17:45 3.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.