JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:45 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zd0a1.name2015-04-17 15:35 0 Job name flag file
[ ]jp_7xF5g8h.align2015-04-17 15:45 33KPSIBLAST alignment in FASTA format
[TXT]jp_7xF5g8h.als2015-04-17 15:45 2.5KAlscript command file for PS/PDF output
[ ]jp_7xF5g8h.blast.gz2015-04-17 15:45 62KCompressed PSIBLAST output file
[TXT]jp_7xF5g8h.coils.csv2015-04-17 15:45 846 COILS output in CSV format
[ ]jp_7xF5g8h.coilseq.lupas_142015-04-17 15:45 5.7KCOILS output, window length 14
[ ]jp_7xF5g8h.coilseq.lupas_212015-04-17 15:45 5.7KCOILS output, window length 21
[ ]jp_7xF5g8h.coilseq.lupas_282015-04-17 15:45 5.7KCOILS output, window length 28
[ ]jp_7xF5g8h.concise2015-04-17 15:45 70KPrediction: coiled-coil, solvent, alignment
[ ]jp_7xF5g8h.concise.blc2015-04-17 15:45 35KBLC format prediction and alignment data
[ ]jp_7xF5g8h.concise.fasta2015-04-17 15:45 35KPrediction: coiled-coil, solvent, alignment
[ ]jp_7xF5g8h.concise.pdf2015-04-17 15:45 229KPDF prediction and alignment data
[ ]jp_7xF5g8h.concise.ps2015-04-17 15:45 4.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_7xF5g8h.fasta2015-04-17 15:43 150 Input query sequence in FASTA format
[ ]jp_7xF5g8h.full_MSA.fasta2015-04-17 15:45 147KFull MSA before JPred filters in FASTA
[TXT]jp_7xF5g8h.full_MSA.fasta.noGaps.html2015-04-17 15:45 69KFull MSA before JPred filters in FASTA
[TXT]jp_7xF5g8h.full_MSA.fasta.withGaps.html2015-04-17 15:45 577KFull MSA before JPred filters in FASTA
[ ]jp_7xF5g8h.hmm2015-04-17 15:45 26KHHMer2 profile of the alignment
[TXT]jp_7xF5g8h.html2015-04-17 15:45 91KHTML prediction and alignment data
[ ]jp_7xF5g8h.input2015-04-17 15:35 143 Raw input data for analysis
[ ]jp_7xF5g8h.jalview2015-04-17 15:45 3.6KJalview annotation file for alignment
[ ]jp_7xF5g8h.jnet2015-04-17 15:45 5.0KJnet secondary structure output
[TXT]jp_7xF5g8h.profile2015-04-17 15:44 22KPSIBLAST profile from alignment
[ ]jp_7xF5g8h.pssm2015-04-17 15:45 29KPSIBLAST PSSM for Jnet
[TXT]jp_7xF5g8h.results.html2016-02-15 12:19 65KJPred results page
[TXT]jp_7xF5g8h.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_7xF5g8h.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_7xF5g8h.seq2015-04-17 15:35 150 Sequence data file
[TXT]jp_7xF5g8h.simple.html2015-04-17 15:45 1.4KBrief HTML: sequence and prediction only
[TXT]jp_7xF5g8h.svg.html2015-04-17 15:45 57KJalview SVG summary of results
[ ]jp_7xF5g8h.tar.gz2015-04-17 15:45 446KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.