JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zina2.name2015-04-17 18:02 0 Job name flag file
[ ]jp_BRoJWTT.align2015-04-17 19:43 33KPSIBLAST alignment in FASTA format
[TXT]jp_BRoJWTT.als2015-04-17 19:43 1.5KAlscript command file for PS/PDF output
[ ]jp_BRoJWTT.blast.gz2015-04-17 19:42 301KCompressed PSIBLAST output file
[TXT]jp_BRoJWTT.coils.csv2015-04-17 19:43 240 COILS output in CSV format
[ ]jp_BRoJWTT.coilseq.lupas_142015-04-17 19:43 1.5KCOILS output, window length 14
[ ]jp_BRoJWTT.coilseq.lupas_212015-04-17 19:43 1.5KCOILS output, window length 21
[ ]jp_BRoJWTT.coilseq.lupas_282015-04-17 19:43 1.5KCOILS output, window length 28
[ ]jp_BRoJWTT.concise2015-04-17 19:43 60KPrediction: coiled-coil, solvent, alignment
[ ]jp_BRoJWTT.concise.blc2015-04-17 19:43 33KBLC format prediction and alignment data
[ ]jp_BRoJWTT.concise.fasta2015-04-17 19:43 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_BRoJWTT.concise.pdf2015-04-17 19:43 160KPDF prediction and alignment data
[ ]jp_BRoJWTT.concise.ps2015-04-17 19:43 2.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_BRoJWTT.fasta2015-04-17 19:39 48 Input query sequence in FASTA format
[ ]jp_BRoJWTT.full_MSA.fasta2015-04-17 19:42 529KFull MSA before JPred filters in FASTA
[TXT]jp_BRoJWTT.full_MSA.fasta.noGaps.html2015-04-17 19:43 450KFull MSA before JPred filters in FASTA
[TXT]jp_BRoJWTT.full_MSA.fasta.withGaps.html2015-04-17 19:43 2.5MFull MSA before JPred filters in FASTA
[ ]jp_BRoJWTT.hmm2015-04-17 19:43 6.6KHHMer2 profile of the alignment
[TXT]jp_BRoJWTT.html2015-04-17 19:43 156KHTML prediction and alignment data
[ ]jp_BRoJWTT.input2015-04-17 18:02 42 Raw input data for analysis
[ ]jp_BRoJWTT.jalview2015-04-17 19:43 1.5KJalview annotation file for alignment
[ ]jp_BRoJWTT.jnet2015-04-17 19:43 1.4KJnet secondary structure output
[TXT]jp_BRoJWTT.profile2015-04-17 19:41 6.0KPSIBLAST profile from alignment
[ ]jp_BRoJWTT.pssm2015-04-17 19:43 7.5KPSIBLAST PSSM for Jnet
[TXT]jp_BRoJWTT.results.html2016-02-15 12:19 24KJPred results page
[TXT]jp_BRoJWTT.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_BRoJWTT.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_BRoJWTT.seq2015-04-17 18:02 48 Sequence data file
[TXT]jp_BRoJWTT.simple.html2015-04-17 19:43 1.0KBrief HTML: sequence and prediction only
[TXT]jp_BRoJWTT.svg.html2015-04-17 19:44 16KJalview SVG summary of results
[ ]jp_BRoJWTT.tar.gz2015-04-17 19:44 742KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.