JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zl0a1.name2015-04-17 18:02 0 Job name flag file
[ ]jp_o7ItMRu.align2015-04-17 19:43 161KPSIBLAST alignment in FASTA format
[TXT]jp_o7ItMRu.als2015-04-17 19:43 2.6KAlscript command file for PS/PDF output
[ ]jp_o7ItMRu.blast.gz2015-04-17 19:42 1.4MCompressed PSIBLAST output file
[TXT]jp_o7ItMRu.coils.csv2015-04-17 19:43 858 COILS output in CSV format
[ ]jp_o7ItMRu.coilseq.lupas_142015-04-17 19:43 5.8KCOILS output, window length 14
[ ]jp_o7ItMRu.coilseq.lupas_212015-04-17 19:43 5.8KCOILS output, window length 21
[ ]jp_o7ItMRu.coilseq.lupas_282015-04-17 19:43 5.8KCOILS output, window length 28
[ ]jp_o7ItMRu.concise2015-04-17 19:43 315KPrediction: coiled-coil, solvent, alignment
[ ]jp_o7ItMRu.concise.blc2015-04-17 19:43 161KBLC format prediction and alignment data
[ ]jp_o7ItMRu.concise.fasta2015-04-17 19:43 163KPrediction: coiled-coil, solvent, alignment
[ ]jp_o7ItMRu.concise.pdf2015-04-17 19:43 1.1MPDF prediction and alignment data
[ ]jp_o7ItMRu.concise.ps2015-04-17 19:43 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_o7ItMRu.fasta2015-04-17 19:39 152 Input query sequence in FASTA format
[ ]jp_o7ItMRu.full_MSA.fasta2015-04-17 19:42 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_o7ItMRu.full_MSA.fasta.noGaps.html2015-04-17 19:43 689KFull MSA before JPred filters in FASTA
[TXT]jp_o7ItMRu.full_MSA.fasta.withGaps.html2015-04-17 19:43 9.5MFull MSA before JPred filters in FASTA
[ ]jp_o7ItMRu.hmm2015-04-17 19:43 26KHHMer2 profile of the alignment
[TXT]jp_o7ItMRu.html2015-04-17 19:43 376KHTML prediction and alignment data
[ ]jp_o7ItMRu.input2015-04-17 18:02 145 Raw input data for analysis
[ ]jp_o7ItMRu.jalview2015-04-17 19:43 3.6KJalview annotation file for alignment
[ ]jp_o7ItMRu.jnet2015-04-17 19:43 5.1KJnet secondary structure output
[TXT]jp_o7ItMRu.profile2015-04-17 19:41 22KPSIBLAST profile from alignment
[ ]jp_o7ItMRu.pssm2015-04-17 19:43 30KPSIBLAST PSSM for Jnet
[TXT]jp_o7ItMRu.results.html2016-02-15 12:19 64KJPred results page
[TXT]jp_o7ItMRu.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_o7ItMRu.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_o7ItMRu.seq2015-04-17 18:02 152 Sequence data file
[TXT]jp_o7ItMRu.simple.html2015-04-17 19:43 1.3KBrief HTML: sequence and prediction only
[TXT]jp_o7ItMRu.svg.html2015-04-17 19:43 56KJalview SVG summary of results
[ ]jp_o7ItMRu.tar.gz2015-04-17 19:43 3.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.