JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:32 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d1zmec1.name2015-04-17 16:14 0 Job name flag file
[ ]jp_gGkkYu6.align2015-04-17 17:31 41KPSIBLAST alignment in FASTA format
[TXT]jp_gGkkYu6.als2015-04-17 17:31 1.6KAlscript command file for PS/PDF output
[ ]jp_gGkkYu6.blast.gz2015-04-17 17:31 1.5MCompressed PSIBLAST output file
[TXT]jp_gGkkYu6.coils.csv2015-04-17 17:31 246 COILS output in CSV format
[ ]jp_gGkkYu6.coilseq.lupas_142015-04-17 17:31 1.5KCOILS output, window length 14
[ ]jp_gGkkYu6.coilseq.lupas_212015-04-17 17:31 1.5KCOILS output, window length 21
[ ]jp_gGkkYu6.coilseq.lupas_282015-04-17 17:31 1.5KCOILS output, window length 28
[ ]jp_gGkkYu6.concise2015-04-17 17:31 76KPrediction: coiled-coil, solvent, alignment
[ ]jp_gGkkYu6.concise.blc2015-04-17 17:31 41KBLC format prediction and alignment data
[ ]jp_gGkkYu6.concise.fasta2015-04-17 17:31 42KPrediction: coiled-coil, solvent, alignment
[ ]jp_gGkkYu6.concise.pdf2015-04-17 17:31 184KPDF prediction and alignment data
[ ]jp_gGkkYu6.concise.ps2015-04-17 17:31 3.6MPrediction: coiled-coil, solvent, alignment
[ ]jp_gGkkYu6.fasta2015-04-17 16:40 49 Input query sequence in FASTA format
[ ]jp_gGkkYu6.full_MSA.fasta2015-04-17 17:31 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_gGkkYu6.full_MSA.fasta.noGaps.html2015-04-17 17:31 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_gGkkYu6.full_MSA.fasta.withGaps.html2015-04-17 17:31 11MFull MSA before JPred filters in FASTA
[ ]jp_gGkkYu6.hmm2015-04-17 17:31 6.8KHHMer2 profile of the alignment
[TXT]jp_gGkkYu6.html2015-04-17 17:31 197KHTML prediction and alignment data
[ ]jp_gGkkYu6.input2015-04-17 16:14 43 Raw input data for analysis
[ ]jp_gGkkYu6.jalview2015-04-17 17:31 1.5KJalview annotation file for alignment
[ ]jp_gGkkYu6.jnet2015-04-17 17:31 1.4KJnet secondary structure output
[TXT]jp_gGkkYu6.profile2015-04-17 17:22 6.2KPSIBLAST profile from alignment
[ ]jp_gGkkYu6.pssm2015-04-17 17:31 7.7KPSIBLAST PSSM for Jnet
[TXT]jp_gGkkYu6.results.html2016-02-15 12:19 26KJPred results page
[TXT]jp_gGkkYu6.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_gGkkYu6.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_gGkkYu6.seq2015-04-17 16:14 49 Sequence data file
[TXT]jp_gGkkYu6.simple.html2015-04-17 17:31 1.0KBrief HTML: sequence and prediction only
[TXT]jp_gGkkYu6.svg.html2015-04-17 17:32 18KJalview SVG summary of results
[ ]jp_gGkkYu6.tar.gz2015-04-17 17:32 2.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.