JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:42 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2a2la1.name2015-04-17 17:26 0 Job name flag file
[ ]jp_bBQQwwS.align2015-04-17 18:42 153KPSIBLAST alignment in FASTA format
[TXT]jp_bBQQwwS.als2015-04-17 18:42 2.6KAlscript command file for PS/PDF output
[ ]jp_bBQQwwS.blast.gz2015-04-17 18:41 1.3MCompressed PSIBLAST output file
[TXT]jp_bBQQwwS.coils.csv2015-04-17 18:42 882 COILS output in CSV format
[ ]jp_bBQQwwS.coilseq.lupas_142015-04-17 18:42 6.0KCOILS output, window length 14
[ ]jp_bBQQwwS.coilseq.lupas_212015-04-17 18:42 6.0KCOILS output, window length 21
[ ]jp_bBQQwwS.coilseq.lupas_282015-04-17 18:42 6.0KCOILS output, window length 28
[ ]jp_bBQQwwS.concise2015-04-17 18:42 300KPrediction: coiled-coil, solvent, alignment
[ ]jp_bBQQwwS.concise.blc2015-04-17 18:42 154KBLC format prediction and alignment data
[ ]jp_bBQQwwS.concise.fasta2015-04-17 18:42 155KPrediction: coiled-coil, solvent, alignment
[ ]jp_bBQQwwS.concise.pdf2015-04-17 18:42 1.0MPDF prediction and alignment data
[ ]jp_bBQQwwS.concise.ps2015-04-17 18:42 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_bBQQwwS.fasta2015-04-17 18:36 156 Input query sequence in FASTA format
[ ]jp_bBQQwwS.full_MSA.fasta2015-04-17 18:41 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_bBQQwwS.full_MSA.fasta.noGaps.html2015-04-17 18:42 681KFull MSA before JPred filters in FASTA
[TXT]jp_bBQQwwS.full_MSA.fasta.withGaps.html2015-04-17 18:42 9.8MFull MSA before JPred filters in FASTA
[ ]jp_bBQQwwS.hmm2015-04-17 18:42 27KHHMer2 profile of the alignment
[TXT]jp_bBQQwwS.html2015-04-17 18:42 354KHTML prediction and alignment data
[ ]jp_bBQQwwS.input2015-04-17 17:26 149 Raw input data for analysis
[ ]jp_bBQQwwS.jalview2015-04-17 18:42 3.7KJalview annotation file for alignment
[ ]jp_bBQQwwS.jnet2015-04-17 18:42 5.2KJnet secondary structure output
[TXT]jp_bBQQwwS.profile2015-04-17 18:39 23KPSIBLAST profile from alignment
[ ]jp_bBQQwwS.pssm2015-04-17 18:42 31KPSIBLAST PSSM for Jnet
[TXT]jp_bBQQwwS.results.html2016-02-15 12:19 66KJPred results page
[TXT]jp_bBQQwwS.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_bBQQwwS.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_bBQQwwS.seq2015-04-17 17:26 156 Sequence data file
[TXT]jp_bBQQwwS.simple.html2015-04-17 18:42 1.4KBrief HTML: sequence and prediction only
[TXT]jp_bBQQwwS.svg.html2015-04-17 18:42 58KJalview SVG summary of results
[ ]jp_bBQQwwS.tar.gz2015-04-17 18:42 3.6MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.