JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:08 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2a65a1.name2015-04-17 17:27 0 Job name flag file
[ ]jp_rn3nzXr.align2015-04-17 19:06 294KPSIBLAST alignment in FASTA format
[TXT]jp_rn3nzXr.als2015-04-17 19:06 5.4KAlscript command file for PS/PDF output
[ ]jp_rn3nzXr.blast.gz2015-04-17 18:54 15MCompressed PSIBLAST output file
[TXT]jp_rn3nzXr.coils.csv2015-04-17 19:06 3.0KCOILS output in CSV format
[ ]jp_rn3nzXr.coilseq.lupas_142015-04-17 19:06 21KCOILS output, window length 14
[ ]jp_rn3nzXr.coilseq.lupas_212015-04-17 19:06 21KCOILS output, window length 21
[ ]jp_rn3nzXr.coilseq.lupas_282015-04-17 19:06 21KCOILS output, window length 28
[ ]jp_rn3nzXr.concise2015-04-17 19:06 595KPrediction: coiled-coil, solvent, alignment
[ ]jp_rn3nzXr.concise.blc2015-04-17 19:06 297KBLC format prediction and alignment data
[ ]jp_rn3nzXr.concise.fasta2015-04-17 19:06 299KPrediction: coiled-coil, solvent, alignment
[ ]jp_rn3nzXr.concise.pdf2015-04-17 19:07 2.0MPDF prediction and alignment data
[ ]jp_rn3nzXr.concise.ps2015-04-17 19:06 38MPrediction: coiled-coil, solvent, alignment
[ ]jp_rn3nzXr.fasta2015-04-17 18:36 527 Input query sequence in FASTA format
[ ]jp_rn3nzXr.full_MSA.fasta2015-04-17 19:03 34MFull MSA before JPred filters in FASTA
[TXT]jp_rn3nzXr.full_MSA.fasta.noGaps.html2015-04-17 19:08 2.9MFull MSA before JPred filters in FASTA
[TXT]jp_rn3nzXr.full_MSA.fasta.withGaps.html2015-04-17 19:08 77MFull MSA before JPred filters in FASTA
[ ]jp_rn3nzXr.hmm2015-04-17 19:06 95KHHMer2 profile of the alignment
[TXT]jp_rn3nzXr.html2015-04-17 19:06 452KHTML prediction and alignment data
[ ]jp_rn3nzXr.input2015-04-17 17:27 514 Raw input data for analysis
[ ]jp_rn3nzXr.jalview2015-04-17 19:06 11KJalview annotation file for alignment
[ ]jp_rn3nzXr.jnet2015-04-17 19:06 18KJnet secondary structure output
[TXT]jp_rn3nzXr.profile2015-04-17 18:50 81KPSIBLAST profile from alignment
[ ]jp_rn3nzXr.pssm2015-04-17 19:06 109KPSIBLAST PSSM for Jnet
[TXT]jp_rn3nzXr.results.html2016-02-15 12:19 210KJPred results page
[TXT]jp_rn3nzXr.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_rn3nzXr.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_rn3nzXr.seq2015-04-17 17:27 527 Sequence data file
[TXT]jp_rn3nzXr.simple.html2015-04-17 19:06 2.5KBrief HTML: sequence and prediction only
[TXT]jp_rn3nzXr.svg.html2015-04-17 19:08 202KJalview SVG summary of results
[ ]jp_rn3nzXr.tar.gz2015-04-17 19:08 24MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.