JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_D7gqNun.input2015-04-17 18:03 253 Raw input data for analysis
[ ]jp_D7gqNun.seq2015-04-17 18:03 262 Sequence data file
[TXT]d2a9da2.name2015-04-17 18:03 0 Job name flag file
[ ]jp_D7gqNun.fasta2015-04-17 19:40 262 Input query sequence in FASTA format
[TXT]jp_D7gqNun.profile2015-04-17 19:43 39KPSIBLAST profile from alignment
[ ]jp_D7gqNun.blast.gz2015-04-17 19:44 5.1MCompressed PSIBLAST output file
[ ]jp_D7gqNun.full_MSA.fasta2015-04-17 19:45 9.4MFull MSA before JPred filters in FASTA
[ ]jp_D7gqNun.align2015-04-17 19:45 222KPSIBLAST alignment in FASTA format
[ ]jp_D7gqNun.pssm2015-04-17 19:45 53KPSIBLAST PSSM for Jnet
[ ]jp_D7gqNun.hmm2015-04-17 19:45 46KHHMer2 profile of the alignment
[ ]jp_D7gqNun.jnet2015-04-17 19:45 9.0KJnet secondary structure output
[ ]jp_D7gqNun.coilseq.lupas_212015-04-17 19:45 10KCOILS output, window length 21
[ ]jp_D7gqNun.coilseq.lupas_142015-04-17 19:45 10KCOILS output, window length 14
[ ]jp_D7gqNun.coilseq.lupas_282015-04-17 19:45 10KCOILS output, window length 28
[TXT]jp_D7gqNun.coils.csv2015-04-17 19:45 1.5KCOILS output in CSV format
[ ]jp_D7gqNun.concise2015-04-17 19:45 440KPrediction: coiled-coil, solvent, alignment
[TXT]jp_D7gqNun.html2015-04-17 19:45 402KHTML prediction and alignment data
[TXT]jp_D7gqNun.simple.html2015-04-17 19:45 1.7KBrief HTML: sequence and prediction only
[ ]jp_D7gqNun.jalview2015-04-17 19:45 5.6KJalview annotation file for alignment
[ ]jp_D7gqNun.concise.fasta2015-04-17 19:45 225KPrediction: coiled-coil, solvent, alignment
[ ]jp_D7gqNun.concise.blc2015-04-17 19:45 223KBLC format prediction and alignment data
[TXT]jp_D7gqNun.als2015-04-17 19:45 3.5KAlscript command file for PS/PDF output
[ ]jp_D7gqNun.concise.ps2015-04-17 19:45 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_D7gqNun.concise.pdf2015-04-17 19:46 1.4MPDF prediction and alignment data
[TXT]jp_D7gqNun.full_MSA.fasta.withGaps.html2015-04-17 19:46 31MFull MSA before JPred filters in FASTA
[TXT]jp_D7gqNun.full_MSA.fasta.noGaps.html2015-04-17 19:46 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_D7gqNun.svg.html2015-04-17 19:46 97KJalview SVG summary of results
[TXT]LOG2015-04-17 19:46 4.7KJPred server log file
[ ]jp_D7gqNun.tar.gz2015-04-17 19:46 9.8MArchive containing complete results
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]jp_D7gqNun.results.html2016-02-15 12:19 105KJPred results page
[TXT]jp_D7gqNun.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_D7gqNun.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.