JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:41 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2a9sa1.name2015-04-17 18:38 0 Job name flag file
[ ]jp_G5tVGs9.align2015-04-17 20:41 170KPSIBLAST alignment in FASTA format
[TXT]jp_G5tVGs9.als2015-04-17 20:41 3.0KAlscript command file for PS/PDF output
[ ]jp_G5tVGs9.blast.gz2015-04-17 20:40 3.1MCompressed PSIBLAST output file
[TXT]jp_G5tVGs9.coils.csv2015-04-17 20:41 1.0KCOILS output in CSV format
[ ]jp_G5tVGs9.coilseq.lupas_142015-04-17 20:41 7.0KCOILS output, window length 14
[ ]jp_G5tVGs9.coilseq.lupas_212015-04-17 20:41 7.0KCOILS output, window length 21
[ ]jp_G5tVGs9.coilseq.lupas_282015-04-17 20:41 7.0KCOILS output, window length 28
[ ]jp_G5tVGs9.concise2015-04-17 20:41 332KPrediction: coiled-coil, solvent, alignment
[ ]jp_G5tVGs9.concise.blc2015-04-17 20:41 170KBLC format prediction and alignment data
[ ]jp_G5tVGs9.concise.fasta2015-04-17 20:41 172KPrediction: coiled-coil, solvent, alignment
[ ]jp_G5tVGs9.concise.pdf2015-04-17 20:41 1.1MPDF prediction and alignment data
[ ]jp_G5tVGs9.concise.ps2015-04-17 20:41 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_G5tVGs9.fasta2015-04-17 20:36 182 Input query sequence in FASTA format
[ ]jp_G5tVGs9.full_MSA.fasta2015-04-17 20:41 5.1MFull MSA before JPred filters in FASTA
[TXT]jp_G5tVGs9.full_MSA.fasta.noGaps.html2015-04-17 20:41 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_G5tVGs9.full_MSA.fasta.withGaps.html2015-04-17 20:41 17MFull MSA before JPred filters in FASTA
[ ]jp_G5tVGs9.hmm2015-04-17 20:41 31KHHMer2 profile of the alignment
[TXT]jp_G5tVGs9.html2015-04-17 20:41 366KHTML prediction and alignment data
[ ]jp_G5tVGs9.input2015-04-17 18:38 174 Raw input data for analysis
[ ]jp_G5tVGs9.jalview2015-04-17 20:41 4.2KJalview annotation file for alignment
[ ]jp_G5tVGs9.jnet2015-04-17 20:41 6.1KJnet secondary structure output
[TXT]jp_G5tVGs9.profile2015-04-17 20:39 27KPSIBLAST profile from alignment
[ ]jp_G5tVGs9.pssm2015-04-17 20:41 36KPSIBLAST PSSM for Jnet
[TXT]jp_G5tVGs9.results.html2016-02-15 12:19 77KJPred results page
[TXT]jp_G5tVGs9.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_G5tVGs9.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_G5tVGs9.seq2015-04-17 18:38 182 Sequence data file
[TXT]jp_G5tVGs9.simple.html2015-04-17 20:41 1.5KBrief HTML: sequence and prediction only
[TXT]jp_G5tVGs9.svg.html2015-04-17 20:41 69KJalview SVG summary of results
[ ]jp_G5tVGs9.tar.gz2015-04-17 20:41 6.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.