JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:45 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2apob_.name2015-04-17 18:03 0 Job name flag file
[ ]jp_RiG2uM7.align2015-04-17 19:45 17KPSIBLAST alignment in FASTA format
[TXT]jp_RiG2uM7.als2015-04-17 19:45 1.6KAlscript command file for PS/PDF output
[ ]jp_RiG2uM7.blast.gz2015-04-17 19:44 48KCompressed PSIBLAST output file
[TXT]jp_RiG2uM7.coils.csv2015-04-17 19:45 360 COILS output in CSV format
[ ]jp_RiG2uM7.coilseq.lupas_142015-04-17 19:45 2.3KCOILS output, window length 14
[ ]jp_RiG2uM7.coilseq.lupas_212015-04-17 19:45 2.3KCOILS output, window length 21
[ ]jp_RiG2uM7.coilseq.lupas_282015-04-17 19:45 2.3KCOILS output, window length 28
[ ]jp_RiG2uM7.concise2015-04-17 19:45 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_RiG2uM7.concise.blc2015-04-17 19:45 18KBLC format prediction and alignment data
[ ]jp_RiG2uM7.concise.fasta2015-04-17 19:45 18KPrediction: coiled-coil, solvent, alignment
[ ]jp_RiG2uM7.concise.pdf2015-04-17 19:45 93KPDF prediction and alignment data
[ ]jp_RiG2uM7.concise.ps2015-04-17 19:45 1.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_RiG2uM7.fasta2015-04-17 19:41 68 Input query sequence in FASTA format
[ ]jp_RiG2uM7.full_MSA.fasta2015-04-17 19:44 59KFull MSA before JPred filters in FASTA
[TXT]jp_RiG2uM7.full_MSA.fasta.noGaps.html2015-04-17 19:45 89KFull MSA before JPred filters in FASTA
[TXT]jp_RiG2uM7.full_MSA.fasta.withGaps.html2015-04-17 19:45 287KFull MSA before JPred filters in FASTA
[ ]jp_RiG2uM7.hmm2015-04-17 19:45 10KHHMer2 profile of the alignment
[TXT]jp_RiG2uM7.html2015-04-17 19:45 69KHTML prediction and alignment data
[ ]jp_RiG2uM7.input2015-04-17 18:03 62 Raw input data for analysis
[ ]jp_RiG2uM7.jalview2015-04-17 19:45 1.9KJalview annotation file for alignment
[ ]jp_RiG2uM7.jnet2015-04-17 19:45 2.1KJnet secondary structure output
[TXT]jp_RiG2uM7.profile2015-04-17 19:43 9.2KPSIBLAST profile from alignment
[ ]jp_RiG2uM7.pssm2015-04-17 19:45 12KPSIBLAST PSSM for Jnet
[TXT]jp_RiG2uM7.results.html2016-02-15 12:19 33KJPred results page
[TXT]jp_RiG2uM7.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_RiG2uM7.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_RiG2uM7.seq2015-04-17 18:03 68 Sequence data file
[TXT]jp_RiG2uM7.simple.html2015-04-17 19:45 1.0KBrief HTML: sequence and prediction only
[TXT]jp_RiG2uM7.svg.html2015-04-17 19:45 24KJalview SVG summary of results
[ ]jp_RiG2uM7.tar.gz2015-04-17 19:45 222KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.