JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:44 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2b0aa1.name2015-04-17 18:39 0 Job name flag file
[ ]jp_rZ09uxH.align2015-04-17 20:43 192KPSIBLAST alignment in FASTA format
[TXT]jp_rZ09uxH.als2015-04-17 20:43 3.2KAlscript command file for PS/PDF output
[ ]jp_rZ09uxH.blast.gz2015-04-17 20:42 4.2MCompressed PSIBLAST output file
[TXT]jp_rZ09uxH.coils.csv2015-04-17 20:43 1.1KCOILS output in CSV format
[ ]jp_rZ09uxH.coilseq.lupas_142015-04-17 20:43 7.8KCOILS output, window length 14
[ ]jp_rZ09uxH.coilseq.lupas_212015-04-17 20:43 7.8KCOILS output, window length 21
[ ]jp_rZ09uxH.coilseq.lupas_282015-04-17 20:43 7.8KCOILS output, window length 28
[ ]jp_rZ09uxH.concise2015-04-17 20:43 376KPrediction: coiled-coil, solvent, alignment
[ ]jp_rZ09uxH.concise.blc2015-04-17 20:43 192KBLC format prediction and alignment data
[ ]jp_rZ09uxH.concise.fasta2015-04-17 20:43 194KPrediction: coiled-coil, solvent, alignment
[ ]jp_rZ09uxH.concise.pdf2015-04-17 20:44 1.4MPDF prediction and alignment data
[ ]jp_rZ09uxH.concise.ps2015-04-17 20:43 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_rZ09uxH.fasta2015-04-17 20:39 201 Input query sequence in FASTA format
[ ]jp_rZ09uxH.full_MSA.fasta2015-04-17 20:43 11MFull MSA before JPred filters in FASTA
[TXT]jp_rZ09uxH.full_MSA.fasta.noGaps.html2015-04-17 20:44 1.0MFull MSA before JPred filters in FASTA
[TXT]jp_rZ09uxH.full_MSA.fasta.withGaps.html2015-04-17 20:44 23MFull MSA before JPred filters in FASTA
[ ]jp_rZ09uxH.hmm2015-04-17 20:43 35KHHMer2 profile of the alignment
[TXT]jp_rZ09uxH.html2015-04-17 20:43 389KHTML prediction and alignment data
[ ]jp_rZ09uxH.input2015-04-17 18:39 193 Raw input data for analysis
[ ]jp_rZ09uxH.jalview2015-04-17 20:43 4.5KJalview annotation file for alignment
[ ]jp_rZ09uxH.jnet2015-04-17 20:43 6.8KJnet secondary structure output
[TXT]jp_rZ09uxH.profile2015-04-17 20:41 30KPSIBLAST profile from alignment
[ ]jp_rZ09uxH.pssm2015-04-17 20:43 40KPSIBLAST PSSM for Jnet
[TXT]jp_rZ09uxH.results.html2016-02-15 12:19 83KJPred results page
[TXT]jp_rZ09uxH.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_rZ09uxH.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_rZ09uxH.seq2015-04-17 18:39 201 Sequence data file
[TXT]jp_rZ09uxH.simple.html2015-04-17 20:43 1.6KBrief HTML: sequence and prediction only
[TXT]jp_rZ09uxH.svg.html2015-04-17 20:44 75KJalview SVG summary of results
[ ]jp_rZ09uxH.tar.gz2015-04-17 20:44 8.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.