JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:43 4.7KJPred server log file
[TXT]README2016-02-15 12:19 2.1KResults file descriptions
[TXT]d2b97a_.name2015-04-17 17:27 0 Job name flag file
[ ]jp_mZjh5Ri.align2015-04-17 18:43 11KPSIBLAST alignment in FASTA format
[TXT]jp_mZjh5Ri.als2015-04-17 18:43 1.7KAlscript command file for PS/PDF output
[ ]jp_mZjh5Ri.blast.gz2015-04-17 18:43 26KCompressed PSIBLAST output file
[TXT]jp_mZjh5Ri.coils.csv2015-04-17 18:43 450 COILS output in CSV format
[ ]jp_mZjh5Ri.coilseq.lupas_142015-04-17 18:43 2.9KCOILS output, window length 14
[ ]jp_mZjh5Ri.coilseq.lupas_212015-04-17 18:43 2.9KCOILS output, window length 21
[ ]jp_mZjh5Ri.coilseq.lupas_282015-04-17 18:43 2.9KCOILS output, window length 28
[ ]jp_mZjh5Ri.concise2015-04-17 18:43 23KPrediction: coiled-coil, solvent, alignment
[ ]jp_mZjh5Ri.concise.blc2015-04-17 18:43 12KBLC format prediction and alignment data
[ ]jp_mZjh5Ri.concise.fasta2015-04-17 18:43 11KPrediction: coiled-coil, solvent, alignment
[ ]jp_mZjh5Ri.concise.pdf2015-04-17 18:43 70KPDF prediction and alignment data
[ ]jp_mZjh5Ri.concise.ps2015-04-17 18:43 1.2MPrediction: coiled-coil, solvent, alignment
[ ]jp_mZjh5Ri.fasta2015-04-17 18:39 83 Input query sequence in FASTA format
[ ]jp_mZjh5Ri.full_MSA.fasta2015-04-17 18:43 22KFull MSA before JPred filters in FASTA
[TXT]jp_mZjh5Ri.full_MSA.fasta.noGaps.html2015-04-17 18:43 31KFull MSA before JPred filters in FASTA
[TXT]jp_mZjh5Ri.full_MSA.fasta.withGaps.html2015-04-17 18:43 119KFull MSA before JPred filters in FASTA
[ ]jp_mZjh5Ri.hmm2015-04-17 18:43 13KHHMer2 profile of the alignment
[TXT]jp_mZjh5Ri.html2015-04-17 18:43 41KHTML prediction and alignment data
[ ]jp_mZjh5Ri.input2015-04-17 17:27 77 Raw input data for analysis
[ ]jp_mZjh5Ri.jalview2015-04-17 18:43 2.2KJalview annotation file for alignment
[ ]jp_mZjh5Ri.jnet2015-04-17 18:43 2.6KJnet secondary structure output
[TXT]jp_mZjh5Ri.profile2015-04-17 18:43 12KPSIBLAST profile from alignment
[ ]jp_mZjh5Ri.pssm2015-04-17 18:43 15KPSIBLAST PSSM for Jnet
[TXT]jp_mZjh5Ri.results.html2016-02-15 12:19 37KJPred results page
[TXT]jp_mZjh5Ri.results_jalview.html2016-02-24 17:18 13KJalview results options
[TXT]jp_mZjh5Ri.results_jalview_app.html2016-02-24 17:18 16KHTML prediction and alignment data
[ ]jp_mZjh5Ri.seq2015-04-17 17:27 83 Sequence data file
[TXT]jp_mZjh5Ri.simple.html2015-04-17 18:43 1.1KBrief HTML: sequence and prediction only
[TXT]jp_mZjh5Ri.svg.html2015-04-17 18:43 29KJalview SVG summary of results
[ ]jp_mZjh5Ri.tar.gz2015-04-17 18:43 151KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.